KEGG   Pandoraea apista: SG18_17325
Entry
SG18_17325        CDS       T03588                                 
Name
(GenBank) RNA polymerase sigma factor RpoS
  KO
K03087  RNA polymerase nonessential primary-like sigma factor
Organism
papi  Pandoraea apista
Brite
KEGG Orthology (KO) [BR:papi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:papi03021]
    SG18_17325
Transcription machinery [BR:papi03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     SG18_17325
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r3 Sigma70_r1_2 HTH_Crp_2 KORA HTH_20
Other DBs
NCBI-ProteinID: AJE99520
Position
475324..476421
AA seq 365 aa
MLKRKRRTSQEEDLAAPESDQDVDDRRSRQDEDVDDAFDEREAEEDDASSPDAAEEGGGT
AATGRKRKSADGDDFGTVLQAELTADTVQHYLNRISVKPLLTPAEELDYSTRAQAGEFAA
RQVMIERNLRLVVSIAKGYLNRGVPLLDLIEEGNLGLMHAIEKFDPGRGFRFSTYATWWI
RQSIERAIMNQARTVRLPVHVIRELNQVLRAKRHLEKSAAYVDGGEQRDARIEDIADLTG
KTPEEITDILALNEHVASLDAPLEIDPGSSLLDLLSDDHSQAPEQEVQHRELEDLMRLWL
SRLSTKHRYVIERRFGLNRVEPATLEELADEMGLTRERVRQIQQEALVKLKRYFASNGVR
KDAVL
NT seq 1098 nt   +upstreamnt  +downstreamnt
atgctcaagagaaagcgtcgtacttcgcaagaggaagacctcgctgccccggagagcgat
caggacgttgacgatcggcgatcccggcaggacgaggacgtggacgacgctttcgacgag
cgcgaggcggaggaggatgacgcctcttcgcccgacgccgccgaagaggggggcggcacc
gccgctaccggccgcaagcgaaaatctgctgacggtgacgacttcggcacagtgctgcaa
gccgaactcacggccgataccgtccagcactatctcaatcgcatcagtgtcaagccgctg
ctgacccccgcggaagaactcgattactccacgcgcgcgcaggccggcgaatttgccgca
cgtcaggtcatgatcgagcgcaatctgcgcctcgtcgtcagcatcgccaagggctatctc
aaccgcggtgtgccgttgctcgatctgatcgaggagggcaatctgggcctgatgcatgcc
atcgagaagttcgacccgggccgtggttttcgcttttctacgtatgccacatggtggatt
cgccagagcatcgaacgcgccatcatgaatcaggcgcgcacggtgcgtctgccggtgcat
gtcattcgcgaactcaatcaggtgctgcgcgcgaagcgccacctggaaaagagtgccgcg
tatgtcgatggtggcgagcagcgcgatgcgcgcattgaggatattgccgatttgaccggc
aagacgcctgaggagatcaccgacatcctcgcgctcaacgagcatgtggcgtcgctcgat
gcgccgctcgaaatcgatcctggcagcagcctgctcgacctgctttccgacgatcacagt
caggcacccgagcaagaggtgcagcaccgggagctggaagacctcatgcgtctgtggctt
tcgcgactgtccaccaagcatcgttatgttatcgagcgccggttcggtctcaatcgcgtg
gaacccgccacgctcgaggaactggccgacgaaatgggactgacccgtgagcgtgtgcgt
cagatccagcaagaggcgcttgtcaaactcaagcgttatttcgcgtcgaacggcgtacgt
aaagacgccgtactctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (13)   

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