KEGG   Pandoraea apista: SG18_18315
Entry
SG18_18315        CDS       T03588                                 
Name
(GenBank) pseudouridine synthase
  KO
K06183  16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
Organism
papi  Pandoraea apista
Brite
KEGG Orthology (KO) [BR:papi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:papi03009]
    SG18_18315
Enzymes [BR:papi01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.19  16S rRNA pseudouridine516 synthase
     SG18_18315
Ribosome biogenesis [BR:papi03009]
 Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    SG18_18315
SSDB
Motif
Pfam: PseudoU_synth_2 S4
Other DBs
NCBI-ProteinID: AJE99665
Position
complement(659751..660470)
AA seq 239 aa
MELDRLLQSQGFGSRKMCRKLIQTGAFAIDGVVHDDPRESVDPLGLQFTLDGEPWEYREH
VYVLLNKPEGFECSTSPTHHEGVHSLLPLPLAVRGVQPAGRLDQDTTGMLLLSDDGPFLH
AMMSPRRHIPKRYVATTKHPVTEAMLQALRDGVLLRDETEPLAATDVMSPSPHEIALTIT
QGKYHQVKRMVAAAGNRVEGLVRIAIGGLPMGNLALGEWRYLSPDELLSLPYEAPASRK
NT seq 720 nt   +upstreamnt  +downstreamnt
atcgagttagatcgcttactgcaatcgcagggtttcggcagccgcaagatgtgccgcaag
ctcattcagaccggcgctttcgccatcgacggcgtggtgcacgacgatccccgtgaatcc
gtagacccgctgggcctgcaattcacgcttgacggtgagccgtgggaataccgcgaacac
gtctacgtgctgcttaataagcccgagggctttgagtgctccaccagcccgacgcaccac
gaaggcgtgcattccctgctgcccctgccgttggccgtgcgcggtgtgcagccggccggc
cgcctcgatcaggatacgaccggcatgttgctgctctccgacgatggaccgttcctgcac
gccatgatgtcgccgcgccgacacatacccaagcgctatgtcgcaacgaccaagcacccg
gtcaccgaagcgatgttgcaggcattacgcgatggcgttctgctacgcgacgaaaccgaa
ccgctggctgcaacggacgtcatgagcccctcgccgcacgagattgccctgacgattaca
cagggcaaataccatcaggtcaaacggatggtcgcagcggcgggcaatcgggtagagggg
ctggtcagaatcgccatcggcggcctgccgatgggaaatctcgcgctcggcgaatggcgt
tatctgtcgccggacgaactgctgtcgctgccgtacgaagcgccggcctcacgcaaatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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