KEGG   Pantoea ananatis PA13: PAGR_g3715
Entry
PAGR_g3715        CDS       T01970                                 
Name
(GenBank) cold-shock DEAD box protein A
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:3.6.4.13]
Organism
paq  Pantoea ananatis PA13
Pathway
paq03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:paq00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    PAGR_g3715
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:paq03019]
    PAGR_g3715
   03009 Ribosome biogenesis [BR:paq03009]
    PAGR_g3715
Enzymes [BR:paq01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.13  RNA helicase
     PAGR_g3715
Messenger RNA biogenesis [BR:paq03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     PAGR_g3715
Ribosome biogenesis [BR:paq03009]
 Prokaryotic type
  rRNA helicases
   PAGR_g3715
SSDB
Motif
Pfam: DEAD Helicase_C DbpA ResIII CMS1 DRTGG AAA_22
Other DBs
NCBI-ProteinID: AER34204
Position
complement(4043903..4045795)
AA seq 630 aa
MTDIQTTFAELGLNAELLESLNGMGYVKPSPIQAECIPHLLAGRDVLGMAQTGSGKTAAF
SLPLLHNIDPTVKAPQILVLAPTRELAVQVAEAVTEFSKHMRGLNVVALYGGQRYDVQLR
ALRQGPQVVVGTPGRLLDHLKRGTLDLSNLRGLVLDEADEMLRMGFIEDVETIMAQIPEG
HQTALFSATMPEAIRRITKRFMKDPQEVRIQSSMTTRPDISQSYWTAYGRKTDALVRFLE
AEDFDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQALREQTLERLKDGRLDILIA
TDVAARGLDVERISLVVNYDIPMDAESYVHRIGRTGRAGRAGRALLFVENRERRLLRNIE
RTMKLTIPEVELPNAELLGQRRLAKFAAKVQQQLESSDLEQYRALLAKMQPEEELDIETL
AAALLKMAQGERPLIVPADAPRPARREFRERDDRRESRDARGPRESRDGDRPRRERRDVG
DMQLYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFGTHSTIELPKGMPGDVLQH
FTRTRILNKPMNMQLLGDAQPHEGGRGERRPGAGAGERRGGGARPEGQGPRRFSSERREG
GREGGRSFNREGGRGPRREDGAAAPRRRDA
NT seq 1893 nt   +upstreamnt  +downstreamnt
atgactgatattcaaaccacttttgcagaacttggcctgaacgccgaactccttgaatca
ctgaacggcatgggctatgtcaagccatccccaatccaggctgagtgtattcctcacctg
ctggcgggccgtgacgtattaggtatggcgcagaccgggagtggtaaaactgcagcgttc
tcgctgccgctgttacacaacatcgatccaactgttaaagcaccgcaaattttggtgctg
gcaccgacccgcgaactggcggtgcaggtagctgaagctgttaccgaattctctaaacat
atgcgcggtctgaacgtggttgccctttacggcggccagcgttatgacgtgcagctgcgc
gccctgcgccagggaccacaggttgtcgtaggtactccaggccgtctgctggatcacctg
aaacgtggcacgttagatctgtctaacctgcgtggtctggtgctggacgaagccgatgaa
atgttacgcatgggcttcatcgaagacgttgaaaccatcatggcgcagatcccagaaggt
catcagaccgcactgttctctgccaccatgccagaagcgattcgtcgtattaccaagcgt
ttcatgaaagatccgcaggaagtgcgcattcagtcaagcatgactacgcgcccagacatc
agccagagctactggacggcttacggccgtaaaactgacgcgctggttcgcttccttgaa
gcagaagacttcgatgctgcgatcattttcgtgcgcactaaaaacgcaacgctggaagtg
gctgaagcgctggagcgcagcggttacaacagtgcggcactgaacggcgatatgaaccag
gcactgcgtgagcagacgctggagcgcctgaaagatggtcgtctggatatcctgattgct
accgacgttgcggcccgtggcctggacgttgagcgtatcagcctggttgttaactacgat
attccgatggacgcagaatcttacgttcaccgtatcggccgtaccggtcgtgctggtcgt
gcaggtcgcgcactgctgttcgtagagaaccgcgaacgtcgtctgctgcgtaacatcgaa
cgcaccatgaagctgaccattccagaagttgagctgccaaatgcagaactgctgggtcag
cgtcgtctggctaagttcgcggcaaaagttcagcagcagctggaaagcagcgatctggaa
cagtaccgtgcgctgctggcgaagatgcagcctgaagaagagctggatatcgaaacgctg
gctgctgcgctgctgaaaatggcacagggtgagcgtccgctgatcgttcctgctgatgca
ccacgtccagcgcgtcgtgaattccgtgagcgtgacgatcgtcgtgagagccgtgatgca
cgtggtccacgcgaaagccgtgatggcgaccgcccacgtcgcgaacgtcgtgacgttggc
gatatgcaactgtaccgcattgaagtgggccgtgacgacggtgttgaagtgcgtcacatc
gtgggcgcaattgccaacgaaggcgatatcagcagccgttacatcggtaacatcaaactg
tttggtacgcactccaccatcgagctgccgaaaggcatgccaggtgatgtgctgcagcac
tttacccgtacgcgtattctgaacaagccaatgaatatgcagctgctgggtgatgctcag
ccgcacgaaggtggccgtggcgagcgtcgtcctggcgctggtgctggcgaacgtcgtggc
ggcggtgcacgtcctgaaggtcagggcccgcgtcgtttctcttctgagcgccgtgaaggt
ggtcgtgaaggcggacgcagcttcaaccgcgaaggcggtcgtggtccacgtcgtgaagac
ggtgcggctgcaccacgtcgtcgtgacgcgtaa

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