KEGG T01970: PAGR

Pantoea ananatis PA13: PAGR_g4003

Entry

PAGR_g4003        CDS       T01970

Name

(GenBank) UvrABC system protein A UvrA

K03701

excinuclease ABC subunit A

Organism

paq Pantoea ananatis PA13

Pathway

paq03420

Nucleotide excision repair

Brite

KEGG Orthology (KO) [BR:paq00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    PAGR_g4003
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:paq03400]
    PAGR_g4003
DNA repair and recombination proteins [BR:paq03400]
Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     PAGR_g4003
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      PAGR_g4003

SSDB

Motif

Pfam:

UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_16 AAA_29 nSTAND1 RsgA_GTPase DnaJ_CXXCXGXG AAA_23 AAA_25 AAA_21 ScfRs Viral_helicase1 NACHT cobW ExoX-like_C

Other DBs

NCBI-ProteinID:

AER34488

Position

4352767..4355595

AA seq 942 aa
MDKIEVRGARTHNLKNINLTIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC
PDHDVPLAAQTVSQMVDQVLEQPEGRRLMLLAPVVKDRKGEHTKTLENLATQGYIRARID
GEVCDLSDPPKLELQKKHTIEVVIDRFKVREDLATRLAESFETALELSGGTAIVADMDDA
DAEELLFSANFACPICGYSMSELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVVQNAEL
SLAGGAIRGWDRRNFYYFQMLRSLSEHLKFDIEAPFSSLPDNVRNVILYGSGKENIEFKY
INDRGDTSIRRHPFEGVLNNMERRYKETESSAVREELAKFISNRACASCEGTRLRREARH
VYVENTTLPTISEMSIGHAMSFFENLKLSGQRAKIAEKVLKEIGDRLSFLVNVGLNYLSM
SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNT
VIVVEHDEDAIRAADHVIDIGPGAGVHGGTIVAEGTVDQIMAEEASLTGQFLSGKREIAV
PAERVKGDPSKVLKITGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR
ALNGATIAEPAPYRDVAGLEHFDKVIDIDQSPIGRTPRSNPATYTGIFTPVRELFAGVPE
SRSRGYNPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY
KGKSIHEVLEMTIEEAREFFDAVPALARKLQTLMDVGLSYIRLGQSATTLSGGEAQRVKL
ARELSKRGTGQTLYILDEPTTGLHFADIQQLLEVLHQLRDQGNTIVVIEHNLDVIKTADW
IVDLGPEGGSGGGEILVSGTPETVANCEKSHTARFLKPLLEK

NT seq 2829 nt +upstreamnt +downstreamnt
atggataagatcgaagttcgtggtgcccgcacccataatttgaaaaacatcaacctgacg
attcctcgcgacaaactcattgtggtgacgggcctgtcaggttccggtaagtcctctctg
gcgtttgatacgctgtatgcggaaggtcagcgccgctatgtggagtcgctctctgcctat
gcgcgccagtttctttctttaatggagaaaccggacgtcgatcatatcgaggggctgtca
ccggcgatctccattgagcaaaagtccacctcgcacaacccgcgatccacggtggggacg
atcacggagattcacgactatttgcgtctgctgtttgcccgcgtgggtgaaccgcgctgt
ccggatcacgacgtgccgctggcggcacagacggtcagccagatggtcgatcaggtgctc
gagcagcctgagggccgccgcctgatgctgctggcgccggtcgtgaaagatcgtaaaggc
gaacacaccaaaacgctggagaatctggcgacgcagggctatatccgcgccaggattgac
ggcgaggtgtgcgatctttccgatccgcccaagctggaactgcagaaaaaacacaccatt
gaagtcgttatcgatcgcttcaaagtgcgtgaagatctggcgacgcgccttgccgagtcg
tttgaaaccgcgcttgaactgtctggcggtacggcaattgttgctgatatggacgatgct
gatgcggaagaactgctgttttcggctaactttgcctgtccgatttgtggatacagcatg
agtgagctggaaccgcgcctgttctcgttcaacaaccccgccggggcctgcccaacctgt
gacggtctgggcgtgcagcaatatttcgatcccgatcgcgtggtgcaaaatgctgagctg
tcgctggccggtggcgctattcgcggctgggatcgtcgtaatttttactatttccagatg
ctgcgctcactgtctgaacaccttaagtttgatattgaagcgccattcagcagcctgcca
gataacgttcgcaacgtaatcctgtatggatccggcaaagagaacattgagtttaaatat
attaacgatcggggtgatacctcgattcgccgccatccgttcgaaggcgtgctgaacaat
atggagcgccgttataaagagacggaatcctccgcagtacgcgaagaactggcgaagttt
attagcaaccgggcctgcgccagctgcgaaggcacacgtctgcgccgcgaagcgcgccac
gtgtatgttgaaaacacgacgttgcccactatttcagagatgagtattgggcacgccatg
tcattttttgaaaacctgaaactgagtggccagcgggctaaaatcgccgagaaagtgctg
aaagagattggcgatcgcctgagttttctggtcaacgtcggcctgaattatctgtcgatg
tcgcgctccgctgaaacgctctccggcggtgaagctcagcgtattcgcctggccagtcag
atcggtgccggcctggtcggcgttatgtacgtgctggatgaaccctccattggtctgcat
cagcgtgataacgagcgcctgcttggtacgctgattcacctgcgcgatttgggtaacacc
gtcattgtggtcgagcatgacgaggatgcgattcgtgccgccgaccacgttattgatatc
ggccctggcgctggagtgcacggtggtacgattgtcgcggaaggaaccgtcgatcagatt
atggctgaagaggcctccctgaccggtcagttcctcagtgggaaacgcgaaatcgccgtg
cccgctgagcgggtgaaaggcgatccgtctaaggtgttgaaaattaccggcgcgcggggt
aataaccttaaggatgtcaccttaaccctgcctgtcggcctgtttacctgtattaccggc
gtatccggttcaggtaaatcgacgctcatcaatgatacgctgttcccaattgcgcagcgc
gccctaaacggcgcaacgattgccgaaccggcaccgtaccgcgacgtagctggactggag
cacttcgataaagttatcgatatcgaccaaagccctatcggccgtacgccgcgctccaac
ccggccacttataccggtattttcacgccggtacgtgagctgtttgccggtgtccctgag
tcccgctctcgcggttacaatcccggccgcttcagctttaacgtccgtggcggacgctgt
gaagcctgccagggtgacggcgtcattaaagttgagatgcactttctgccggatatctat
gtgccgtgcgatcagtgcaaaggcaaacgctataaccgtgaaacgctggagattaaatac
aaaggcaaaagcattcacgaagtgctggaaatgaccattgaagaagcccgcgagttcttt
gatgccgttccggcgctggcgcgtaagctgcaaacgctgatggacgtaggtttatcctat
atccgtctgggccagtcggcgacgacactctccggtggtgaagcccagcgtgtgaagctg
gcgcgtgaattgtcgaaacgcggtaccggccagacgctgtatatcctggatgaaccgacc
accgggttacactttgccgatattcagcagttgctggaagttctgcaccagctgcgcgat
cagggcaacacgattgtggtgattgaacacaatcttgacgtgattaaaacggcggactgg
attgtcgatctgggcccagagggcggcagcggcggcggcgaaattctggtatcaggtacg
ccagaaaccgtggcgaactgcgagaaatcgcataccgcgcgcttcctgaagcccttgctg
gaaaaataa

All links

Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (17)   
   Pfam (17)   
All databases (24)   

Download RDF

DBGET integrated database retrieval system