KEGG   Psychrobacter arcticus: Psyc_0744
Entry
Psyc_0744         CDS       T00256                                 
Symbol
uvrB
Name
(GenBank) Excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
par  Psychrobacter arcticus
Pathway
par03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:par00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Psyc_0744 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:par03400]
    Psyc_0744 (uvrB)
DNA repair and recombination proteins [BR:par03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Psyc_0744 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      Psyc_0744 (uvrB)
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII UVR DEAD Kinesin DUF87 SWI2_SNF2 AAA_30 Microtub_bd AAA Collagen_bind_2
Other DBs
NCBI-ProteinID: AAZ18598
UniProt: Q4FTR0
Position
887460..889571
AA seq 703 aa
MRMPEPRSSRQLNQLATQLQGEAEISGVNASGTQISSRAFEMVTEFEPAGDQPQAIKKLV
NGINSGMDEQLLLGVTGSGKTYTMAKVISETQRPTIIMAHNKTLAAQLYGEFKSFFPNNA
VEYFVSYYDYYQPEAYVAASDTFIEKDSAINDHIDQMRLSATRALLERRDAIIVASVSCI
YGLGDPESYLKMLLHVVVGDKIDRTATIKRLVEMQYTRNELDFGRGTYRLRGELLDIYPA
ESEQLAVRVHLFDNEVEKITWFDPLTGKTVRTVPRITIYPKSHYVTPRNKLEAASHTIRA
ELEPRLEYFRENNKLIEAQRLKERTQYDLEMIQQLGYCNGIENYSQHLSGRPSGEAPPTL
FDYIPEDALLFIDESHVTVSQIGAMYKGDRSRKENLVNYGFRLPSAMNNRPMKFEEWERI
KPKTIYVSATPALYELEHSEQVVEQVVRPTGLIDPEIEIRPVLTQVDDVLSEITKRREKD
ERVLITTLTKRMSEDLTSYLKEYDVKVAYLHSDIDTLERMQIIHELRTGVHDVLVGINLL
REGLDMPEVSLVAIFDADKEGFLRSERALIQTIGRAARHINGKAILYADRITNSMQKAID
ETDRRREKQVAFNLEHNITPTGARRSITDKIDTGDDLDANDNQAIPVKSNLPDVDISILR
SPDLLAKEINRLEKLMKQMSRDLKFEDAAKTRDKVLELKAHLI
NT seq 2112 nt   +upstreamnt  +downstreamnt
atgcgaatgcctgaaccgcgctcatcgcgtcagttaaaccaattggccactcagctacaa
ggcgaagctgaaattagtggtgttaatgcgtctggtacgcaaatatcaagtcgtgccttt
gagatggttaccgaatttgagcctgcgggggatcagccgcaagcgatcaaaaagctggtt
aacggtatcaattctggtatggatgagcagttattactgggcgtgacgggttctggtaag
acgtataccatggcaaaggtcatctctgagactcaacgcccaaccattatcatggcgcat
aataagacgcttgccgcccagttatatggtgaatttaaatcgtttttccctaataatgca
gttgaatatttcgttagttattatgactattatcagccggaagcatatgtcgcagcgagc
gatacctttatcgaaaaagacagcgccattaatgatcatattgaccagatgcgtctgtca
gccacacgtgcactacttgagcgtcgtgatgcaattatcgtcgcatcggtatcatgcatt
tatggtttgggtgatccagaaagttatctgaaaatgctgctccacgtcgtcgtcggtgac
aaaatagaccgcaccgcgacgattaagcgtctggttgagatgcaatatacgcgtaacgag
ctggactttgggcgtggtacttatcgtctgcgcggtgagctactagatatctatcctgct
gagtccgagcagctggctgtgcgtgtacatttgtttgataacgaagtggaaaaaattact
tggtttgaccctttaacgggcaaaacggtgcgtactgtaccgcgcattaccatctatcca
aaatcacattatgtgacaccgcgtaataaactggaagctgccagtcataccatccgcgcc
gagcttgagccgcggttagagtattttcgtgaaaataataaactgattgaagcacaacgt
ctcaaagagcgtacccagtatgaccttgagatgattcagcagctcggctactgtaacggt
attgagaactactcacagcatctgtctggtcgcccgtcaggtgaagcgccgccgacgttg
tttgattacattccagaagatgcgctgctattcattgatgaatcgcacgtgacggtatcg
caaattggcgcgatgtataaaggcgatagatcacgtaaagaaaatctcgtcaattacggc
tttcgtctaccgagtgcgatgaataaccgtccgatgaagtttgaagagtgggagcgtatt
aagcccaagaccatttatgtcagcgctacgcctgcgttgtatgagcttgagcatagcgag
caagtggtcgagcaagtggtgcgtccgactggtttgattgaccctgagattgagattcgt
cccgtattgacgcaagtcgatgatgtgttgtctgagattaccaaacgccgtgaaaaagat
gagcgcgtactgattacgactttgactaagcgaatgtcagaggatttgaccagttatctg
aaagaatatgatgtcaaagtcgcctatttacattcggatattgatacccttgagcgcatg
cagattattcatgaattgcgtactggtgtacatgatgtgctggtcggcattaacttgcta
cgtgaaggtcttgatatgcctgaggtgtcattggtcgcgatatttgatgcagataaagag
ggctttttgcgctctgagcgtgccttgattcagactattggtcgtgctgcccgtcatatt
aatggtaaagcgattctttatgccgatcgtattaccaatagtatgcaaaaagcgattgat
gagacggatcgtcgccgcgaaaaacaagtggcatttaaccttgagcataacattacgcca
acaggtgctcgccgtagtatcacggataaaatcgatacgggcgatgaccttgatgccaat
gataatcaagcgattccggtcaaaagcaatctacctgatgttgatatcagtatcttacgc
agtcctgatttgctcgccaaagaaattaatcgccttgagaagctcatgaagcagatgtcg
cgtgacttgaagtttgaagatgcggcaaaaacacgtgataaggtgcttgagttaaaggcg
catttgatttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (13)   
   Pfam (13)   
All databases (38)   

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