KEGG   Psychrobacter arcticus: Psyc_1474
Entry
Psyc_1474         CDS       T00256                                 
Symbol
hupB
Name
(GenBank) putative DNA-binding protein HU-beta
  KO
K03530  DNA-binding protein HU-beta
Organism
par  Psychrobacter arcticus
Brite
KEGG Orthology (KO) [BR:par00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:par03032]
    Psyc_1474 (hupB)
   03036 Chromosome and associated proteins [BR:par03036]
    Psyc_1474 (hupB)
   03400 DNA repair and recombination proteins [BR:par03400]
    Psyc_1474 (hupB)
DNA replication proteins [BR:par03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    Psyc_1474 (hupB)
Chromosome and associated proteins [BR:par03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    Psyc_1474 (hupB)
DNA repair and recombination proteins [BR:par03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      Psyc_1474 (hupB)
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_2 HU-CCDC81_euk_1 DUF2267 VWA_3
Other DBs
NCBI-ProteinID: AAZ19322
UniProt: Q4FRN6
Position
complement(1792826..1793098)
AA seq 90 aa
MNKSELIDSIAEKSGLNKTQAGDALNAVMESVGEALEAGDSISLVGFGTFSVKDRKARTG
RNPKTGEELSIPASKAPSFKAGKNLKERLN
NT seq 273 nt   +upstreamnt  +downstreamnt
atgaataaatcagaattaattgatagtattgctgagaaaagtggtctaaacaaaacccaa
gctggcgatgcattgaatgcggttatggaaagcgttggcgaagctctagaagctggcgat
agcatctcattggttggttttggtacttttagcgtaaaagaccgtaaagctcgtactggc
cgtaaccctaagactggcgaagagctaagtatcccagccagtaaagcaccaagctttaaa
gctggtaaaaacttgaaagagcgtttgaactaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (35)   
   KEGG ORTHOLOGY (1)   
   RefGene (32)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (48)   

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