KEGG   Paraburkholderia aromaticivorans: CJU94_09590
Entry
CJU94_09590       CDS       T05169                                 
Name
(GenBank) excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
parb  Paraburkholderia aromaticivorans
Pathway
parb03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:parb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    CJU94_09590
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:parb03400]
    CJU94_09590
DNA repair and recombination proteins [BR:parb03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CJU94_09590
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      CJU94_09590
SSDB
Motif
Pfam: ABC_tran UvrA_DNA-bind nSTAND1 DnaJ_CXXCXGXG AAA_16 AAA_21 AAA_29 RsgA_GTPase DUF4350 DUF5351
Other DBs
NCBI-ProteinID: ASV98403
UniProt: A0A248VH90
Position
1:complement(2083527..2086250)
AA seq 907 aa
MDAIRNKPRPAPPASGTAAFTGFVRVRGAREHNLKNVDVQIPRDALVVFTGVSGSGKSSL
AFGTLYAEAQRRYFESVAPYARRLIDQVGVPEVDAIEGLPPAVALQQQRGTPSTRSSVGS
VTTLSSLVRMLYSRTGDYPPKQPMLFAEDFSPNTVQGACPTCHGLGRVYEVTEKSMVPDD
SLTIRERAIAAWPPAWHGQNLRDILVTLGYDVDTPWRDLPKKDRDWILFTDEQPTAPVYA
GLTPKETRAALKRKDEPSYQGTFTGARRYVLHTFANTQSALMKKRVSQFMIGSVCPACHG
KRLKKEALSVKFAGLDIGEFSQLPLARLAAMLEPIARGEWPEADAANSGNSAGNGAGNSA
GKAASKGSVLSKSAMRDAVDKRVAAGGSAHKASPDVRRTPNLSEEKRVAAQRISAELLER
LTTLVDLGLGYLALERSTPTLSSGELQRLRLATQLSSQLFGVVYVLDEPSAGLHPADGEA
LFSALQGLKAAGNSLFVVEHDLQMMRRADWLVDVGPAAGEAGGHVVYSGPPAGLAKVEAS
QTRRHLFAPPAPVERMPREPAGWLRLAGITRNNLHGLDAAFPLGCLTAVTGVSGSGKSSL
VSQALPELIASHLGRAFENPDDDEQDPLLAATAMPTGGHIAAGMDAVRRLVRVDQKPIGR
TPRSNLATYTGLFDHVRKLFADTPLARKRRYSAGRFSFNVAQGRCPTCEGEGFVSVELLF
LPSVYAPCSTCHGSRYNTQTLEVTWRDKNIAEVLGFTVDAACDFFADEASVMRALKVLRD
IGLGYLRLGQPATELSGGEAQRIKLATELQRAQRGDTLYILDEPTTGLHPVDVDRLMVQL
QGLVDAGNTVVVVEHDMRVAAQSDWVIDVGPGAGDAGGKIVASGTPAQVVRAKDSRTAEY
LREQLVA
NT seq 2724 nt   +upstreamnt  +downstreamnt
atggacgccatccgcaacaagcctcgcccagcaccgcccgcttccggcacggccgcattc
accggcttcgtacgcgtgcgcggcgctcgcgagcacaacctgaagaacgtcgacgtgcag
attccacgtgacgcgctggtcgtcttcaccggcgtgtccggttcaggcaaatcgtcgctg
gcgttcggcacgttgtatgccgaggcgcagcggcgctatttcgaatccgtcgcgccgtat
gcgcggcgtctgatcgaccaggtcggcgtgccggaagtcgacgctatcgaaggcctgccg
cccgcggtcgccttgcagcagcagcgcggcacgccgagcacgcgctcgtcggtgggcagc
gtgaccacgttgtcgagtctggtgcgcatgctgtattcgcgcaccggcgactatccgccg
aagcagcccatgctgttcgccgaagatttctcgccgaacacggtgcaaggcgcctgcccg
acttgccatggactcggccgcgtgtacgaggtcaccgaaaaatcgatggtgcccgacgac
tcgctgaccattcgcgaacgcgcgattgccgcatggccgcccgcgtggcatggacagaat
ctgcgcgacattctggtgacgctcggttacgacgtcgatacgccgtggcgcgacttaccg
aagaaagaccgcgactggatcctcttcaccgacgaacagccgaccgcgcccgtctacgcg
ggcctcacgccgaaggaaacccgcgccgcgctcaagcgcaaggacgagccgagctatcag
ggcacgttcaccggcgcacgccgctacgtgctgcacacgttcgcgaacacccaaagcgcg
ctgatgaagaaacgcgtctcgcagttcatgatcggcagcgtctgcccggcctgtcatggc
aagcgactcaagaaagaagcgctgtccgtgaagttcgccgggctcgatatcggcgagttt
tcgcagttgccgctcgcccggcttgccgcgatgctcgaaccgatcgcacgcggcgaatgg
cccgaagcggacgccgcgaattcaggcaacagcgcaggcaacggcgcaggcaacagcgcg
ggtaaagccgccagcaaaggcagcgtgctcagcaagagcgccatgcgcgatgccgtcgac
aagcgggtcgccgcaggcggttccgcgcacaaagcctcgcccgacgtgcggcgcacgccc
aacctgtccgaggagaagcgcgtcgctgcccaacgcatctcggccgaactgctcgagcgc
ctgacgacgctggtcgatctgggcctcggctatctcgcgttggagcgcagcacgcccacg
ctatcgtccggcgaactgcagcgcctgcgactcgccacacagttgtcgtcgcaattgttc
ggcgtcgtgtacgtgctcgatgagccatcagccggtctgcatcccgccgatggcgaagca
ctcttcagcgcgttgcaaggattgaaggcggcgggcaattcgctgtttgtcgtcgaacac
gatctgcagatgatgcggcgcgccgactggctggtcgacgtcggtcccgcagcgggtgaa
gccggcggccatgtggtttacagcgggccgcccgccggactcgcgaaggtggaggcgtcg
caaacgcgccggcatctgttcgcgccgccagcgcctgtcgaacgcatgccgcgcgagcct
gcgggctggctgcggcttgccggcatcacgcgcaacaatctgcacgggctcgacgccgcg
tttccgctcggctgtctgactgccgtcacaggcgtgtccggctccggcaaatcgagcctc
gtgagccaggcattgcctgagctgatcgcaagccaccttggacgcgccttcgaaaacccg
gacgacgacgagcaagacccgttgctcgccgctaccgccatgccgaccggcggccacatc
gccgcagggatggacgccgtgcgacggctcgtacgcgtcgatcagaaaccgatcggccgc
acgccgcgctccaacctcgccacttacacgggcctgttcgaccacgtgcgcaaactgttc
gccgatacgccgctcgcccgcaagcgccgctacagcgcgggccgcttttcgttcaacgta
gcgcaaggccgttgcccgacttgcgaaggcgaaggctttgtcagcgtcgaactgctgttc
ctgccgagcgtctacgcgccctgctcgacgtgtcacggtagccgctacaacacgcagacg
ctggaagtcacgtggcgcgataaaaatatcgccgaggtgctcggcttcacggtcgacgcg
gcctgcgacttcttcgccgacgaagccagcgtgatgcgcgcattgaaagtgctgcgcgac
atcggcctcggctatctgcggctcggccagccggccaccgagctgtccggcggcgaagcc
cagcgcatcaaactcgccaccgaactgcaacgcgcgcaacgcggcgacacgctgtacatc
ctcgacgaaccgaccaccggcctgcatcccgtcgacgtcgaccggctcatggtgcaactc
cagggactcgtggatgcgggcaatacggtagtggtcgtggagcacgacatgcgggtggcc
gcgcaaagcgactgggtgatcgacgtcggcccgggcgccggcgatgccggcggcaaaatc
gtggcaagcggcacgccagcccaggtcgtgcgcgcgaaagacagccgcaccgccgagtac
ctgcgggaacaactcgtagcgtga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (18)   

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