KEGG   Parabacteroides sp. CT06: CI960_18305
Entry
CI960_18305       CDS       T05011                                 
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
  KO
K06168  tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
Organism
parc  Parabacteroides sp. CT06
Brite
KEGG Orthology (KO) [BR:parc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:parc03016]
    CI960_18305
Enzymes [BR:parc01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.3  tRNA-2-methylthio-N6-dimethylallyladenosine synthase
     CI960_18305
Transfer RNA biogenesis [BR:parc03016]
 Prokaryotic type
  tRNA modification factors
   Methylthiotransferases
    CI960_18305
SSDB
Motif
Pfam: UPF0004 Radical_SAM TRAM TRAM_2 Fer4_12
Other DBs
NCBI-ProteinID: AST55163
UniProt: A0A223HRT0
Position
complement(4120961..4122334)
AA seq 457 aa
MVNQENGVDLKSATQSDERKLFIETYGCQMNVADSEVVASIMKMDGYSMTENIEEADAIF
VNTCSVRDNAEQKIYGRLQYFQSLKRKKKSLIVGVLGCMAERVKEDLIHVHHADLVVGPD
SYLDLPNLVGAVEHGEKAINVELSTQETYKDVIPLKLPGVHISGFVSIMRGCNNFCTYCI
VPYTRGRERSRDIESILNEIRDMHEKGFKEVTLLGQNVNSYSFEKEGETITFPILLDRVA
KEVPDMRIRFTTSHPKDMSDDTLRVIAANDNICKFIHLPAQSGSSRILKVMNRKYTREWY
LDRIAAIRRIVPDCAISTDLFCGFHSETEEDYQETLSLMREVGYDSAFLFKYSERPGTYA
ASHLEDNVPEEEKVRRLQGMIDLQNKLSEESNLRDIGKTFEVLIEGFSKRSREQLFGRTS
QNKVVIFDKKNYHVGQFIKVKIHKASSATLFGEPVEE
NT seq 1374 nt   +upstreamnt  +downstreamnt
atggtaaatcaagaaaacggtgtggacttaaaatccgctacccaaagcgatgaacgaaag
ttgtttatcgagacctacggctgtcagatgaatgtggcggacagcgaagttgtagcttct
atcatgaagatggatggctatagtatgacggagaatatcgaggaggcggatgccatcttc
gtgaatacttgctccgtacgcgacaacgccgaacagaaaatctatgggcggctacagtat
ttccagtctttaaaacggaaaaagaagtcattaattgtcggtgtattgggatgtatggcc
gaacgagtgaaggaagacctgatccatgtgcatcatgccgacttggtggtaggaccggat
tcttatctggacttgccgaacttggtgggagcggtagagcacggagagaaagcgatcaac
gtggagctttctacccaagagacctataaggatgttattcctttgaagttaccgggcgta
catatctccggtttcgtgtctattatgcgcggttgtaataatttctgtacgtattgcatc
gtaccttatacaagaggacgcgagcgtagccgggacatcgagagtatcttgaatgagata
cgggatatgcatgagaaaggctttaaggaagttacgttgttgggacaaaatgtaaactcc
tattctttcgagaaagaaggtgagaccataaccttcccgatcttgttggatcgtgtggcg
aaagaggttcccgatatgcgaattcgttttacgacctcccatccgaaggacatgagcgat
gataccttacgtgtgattgccgcaaacgacaatatctgtaagtttatccatctgcctgcc
caatccggcagcagtcgcatcttgaaggtcatgaatcgtaaatatactcgtgaatggtat
ctggaccgtatagcggcgatccgtcgtatcgtaccggattgcgctatctcgactgattta
ttctgcggtttccattccgagaccgaggaggattatcaagagactttatccttgatgcgt
gaagtgggatatgatagtgctttcttatttaaatattccgaacgtccgggtacatatgcc
gctagccatttggaggataatgtaccggaagaagagaaggtacgccgtttgcaaggtatg
atcgatttgcaaaataagttgtccgaggaaagtaacttgcgggatataggcaagactttc
gaggttctgatagaaggattctcgaaacgttcccgtgagcagttgttcggacgaaccagc
caaaacaaggtggtcatctttgataagaagaactatcatgtaggtcaattcataaaagtc
aagatccataaggcttcctcggctaccctgttcggggaacctgtggaggaataa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (25)   

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