KEGG   Paracoccus sp. Arc7-R13: EOJ32_14795
Entry
EOJ32_14795       CDS       T06050                                 
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
  KO
K01928  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
Organism
parr  Paracoccus sp. Arc7-R13
Pathway
parr00300  Lysine biosynthesis
parr00550  Peptidoglycan biosynthesis
parr01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:parr00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    EOJ32_14795
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    EOJ32_14795
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:parr01011]
    EOJ32_14795
Enzymes [BR:parr01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.13  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
     EOJ32_14795
Peptidoglycan biosynthesis and degradation proteins [BR:parr01011]
 Precursor biosynthesis
  Amino acid ligase
   EOJ32_14795
SSDB
Motif
Pfam: Mur_ligase_M Mur_ligase_C Mur_ligase LpxD DUF2249
Other DBs
NCBI-ProteinID: AZY95304
UniProt: A0A3T0Q5N7
Position
complement(2981055..2982524)
AA seq 489 aa
MTLSQLGLRAPGGRDPRITGLSIDSRTIKPGHLFAALPGSAVHGGEFIQYALRMQAAAVL
TDRQGAEIAADVLSGWDGALIVAEDPRAALAGAASLWFADQPDHVVAVTGTSGKTSVASF
TRQIWQALGHKAISLGTMGVEGDHQAKLAHTTPDPLTLHRVLAEAVAAGVTHAAMEASSH
GLDQRRLDGVRVEAGAFTNFSQDHLDYHAGFDEYFAAKALLFNRVLEDGAAAVINIDSQR
GRQMADIATDRGLALTTVGTGEAAMLRILGQRYDATGQDLRFSVMGRAHLVRLPLIGGFQ
AENVLAAMGLCLASGDSADDILRVLPQLTTVRGRMQLVAQRENGAAVFVDYAHKPGAVVA
ALQSLRPHVMGRIVCIIGAGGDRDRGKRPLMGEAARDHADVVIVTDDNPRTEDPALIRAA
VMASAGPDATEIADRAEAILRGVDALQPGDALLICGKGHETGQIVGQDVYPFDDAEQASV
AVAALDGRI
NT seq 1470 nt   +upstreamnt  +downstreamnt
gtgacgctgtcgcagctggggctgcgcgcccccggtgggcgtgacccgcggatcacgggg
ctgtccatcgacagccgcacgatcaagcccgggcacctgttcgcggccctgccgggatcg
gccgtccatggcggcgaattcatccagtacgcgctgcgcatgcaggccgccgccgtcctg
accgaccgtcagggcgccgagatcgccgccgacgtcctgtcgggctgggacggggcgctg
atcgtggccgaggatccgcgcgcagccctggccggcgccgcgtcgctgtggttcgccgat
cagcccgaccatgtcgtggccgttaccggcaccagcggcaagaccagcgtggccagcttc
acccgtcagatctggcaggcgctgggccacaaggcgatcagcctgggcacgatgggggtc
gagggcgatcaccaggcgaagcttgcccataccacccccgatccgctgaccctgcaccgc
gtcctggccgaggcggtcgccgcgggcgtcacccatgccgcgatggaggcctccagccac
ggattggatcagcgccgcctggacggggtgcgggtcgaggccggggccttcaccaatttc
agccaggatcacctggattaccacgcgggctttgacgaatatttcgcggccaaggccctt
ttgttcaaccgcgtgctggaggacggagccgctgccgtcatcaacatcgacagccagcgc
ggacgccagatggccgacatcgcgaccgatcgcggcctggccctgaccaccgtcggcacc
ggagaggccgcgatgctgcgcatcctgggccagcgctatgacgcgacggggcaggatctg
cggttctcggtgatggggcgggcgcatctggtgcggctgccgctgatcggcgggttccag
gcggaaaacgtgctggcggcgatgggcctgtgcctggcctcgggcgacagcgccgacgac
atcctgcgcgtgctgccgcagctgaccaccgtgcggggccgaatgcagctggtcgcgcag
cgcgagaacggtgcggcggtctttgtcgattacgcccacaagccgggcgcggtggtcgcc
gcgctgcaatcgctgcgcccgcatgtgatggggcgcatcgtctgcatcatcggcgcgggc
ggcgaccgcgaccggggcaagcgcccgctgatgggcgaggccgcgcgcgatcatgccgat
gtggtgatcgtcaccgacgacaacccccggaccgaggacccggccctgatccgtgccgcc
gtcatggccagcgcgggccccgacgcgacagagatcgccgaccgggccgaggcgatcctc
cgcggcgtcgatgcgctgcaaccgggcgacgcgctgctgatctgcggcaagggtcatgag
accggccagatcgtggggcaggacgtctatcccttcgacgatgccgaacaggcctcggtc
gcggtggcggcactggacgggcggatatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (23)   

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