KEGG   Pseudoalteromonas arctica: PARC_a0125
Entry
PARC_a0125        CDS       T05179                                 
Name
(GenBank) hypothetical protein
  KO
K20918  LuxR family transcriptional regulator, positive regulator of biofilm formation
Organism
part  Pseudoalteromonas arctica
Brite
KEGG Orthology (KO) [BR:part00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:part03000]
    PARC_a0125
Transcription factors [BR:part03000]
 Prokaryotic type
  Helix-turn-helix
   LuxR family
    PARC_a0125
SSDB
Motif
Pfam: GerE Sigma70_r4_2 VpsT-like_REC Sigma70_r4 HTH_40 HTH_24 HTH_23 HTH_10 HTH_7 HTH_5 Sigma70_ECF
Other DBs
NCBI-ProteinID: ATC84900
UniProt: A0A290S135
Position
I:complement(122963..123619)
AA seq 218 aa
MSSSAFLLLDQEPINTIGINVLEPLLKTQGLDVTTGTNILDIPEGTRLLFIETSSKDAWG
KLKEQLVNLRIKCDIILFNLDENPELANRALLSGIRGVFYTTDNADVLMKGIRLLMEDQL
WYRRDIMCNALNRMLQFNKDALHKLTEGDIEPVKLTKREKAIISLMSNGSKNKEIAEELS
ISPHTVKTHLYSAFRKTKCRNRIELLSWAQQNIPDEIR
NT seq 657 nt   +upstreamnt  +downstreamnt
atgagcagttcagcctttttgttattagatcaagagccaattaacactattggcataaac
gttttagaacctttgttaaaaacgcaaggccttgacgtaaccacaggtacgaacatttta
gatatacctgaagggactcgacttttgtttattgaaacatcaagtaaagatgcatggggt
aaactaaaagaacaactagtaaacctgcgtattaaatgcgatatcatattattcaaccta
gacgaaaacccagagcttgctaatcgcgcgcttttgagcggtattcgcggcgtattttat
acaaccgataacgcggatgtattaatgaaaggtatacgcctactaatggaagatcaactt
tggtatcgtcgcgatattatgtgtaatgcattaaatcgtatgttgcagtttaacaaagac
gcgctgcataaactaaccgaaggcgatattgagccggttaaacttactaagcgggaaaaa
gcaattatctcattaatgagtaatggctctaaaaataaagaaatcgctgaagaacttagc
attagcccacatactgttaaaacacatttatacagcgcatttagaaaaactaaatgtcgt
aaccgtattgaactcctatcttgggcacaacaaaatatccctgatgaaattcgttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (18)   

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