KEGG T05179: PARC

Pseudoalteromonas arctica: PARC_a1854

Entry

PARC_a1854        CDS       T05179

Symbol

msbA

Name

(GenBank) ATP-binding cassette, subfamily B, bacterial MsbA

K11085

ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]

Organism

part Pseudoalteromonas arctica

Pathway

part02010

ABC transporters

Brite

KEGG Orthology (KO) [BR:part00001]
09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    PARC_a1854 (msbA)
09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:part02000]
    PARC_a1854 (msbA)
Enzymes [BR:part01000]
7. Translocases
  7.5  Catalysing the translocation of carbohydrates and their derivatives
   7.5.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.5.2.6  ABC-type lipid A-core oligosaccharide transporter
     PARC_a1854 (msbA)
Transporters [BR:part02000]
ABC transporters, eukaryotic type
  ABCB (MDR/TAP) subfamily
   ABCB-BAC subgroup
    PARC_a1854 (msbA)

SSDB

Motif

Pfam:

ABC_membrane ABC_tran SMC_N AAA_22 DEAD RsgA_GTPase AAA_29 AAA_16 ABC_ATPase MMR_HSR1

Other DBs

NCBI-ProteinID:

ATC86417

UniProt:

A0A290S4E9

Position

I:1804529..1806298

AA seq 589 aa
MLLYLESVMDQSTTQIYKRLVSYVGTYKSVAFVAIIGMIGYSAMDALFIQLMKPFIDQGL
NQRNTEVLKYAPFVVIALVLGRGVFNFMSSYCLSYVGSQVVRSLRQELFEHILHLPVSFH
DKNSTGDLISKITFDTEQVQQAITKALLIVVREGAFVVFLLAVMFYTSWQLSLIFLVIIP
LVAIIVAVVSKRFRHISKNIQSAMGQVTRSSEQMLSGHKVIHGFGGQDQEINHFSKINNH
NRQQRIKMDATKALSVSIIQILAASAMAVILWAVSLPSMIDTITSGDFMALIASMMMLLR
PLKQLANVNSDMQRGISAAQSIFLVLDEEMEKDTGTVSVDKVKGLIEVKNVTFKYPTKDE
AVLNDLSLTIEAGESIALVGRSGSGKSTISNLLPRYYDLELPSEILLDGIALQDYKLTDL
RRQFALVSQQVVLFNDTIANNICYGIKHDVSVAELEQVAKQAHVWEFVKDLPEQLNTMVG
ENGVMLSGGQRQRIAIARAILKDAPILILDEATSALDTESEKLIQQALETLMKDKTSIVI
AHRLSTIENSDRIYVIDNGRVIESGDHSSLLANDGTYSALCKMQFGDQA

NT seq 1770 nt +upstreamnt +downstreamnt
ttgttactgtatttagagagtgttatggatcaaagtactacacaaatttataaacgtctt
gtctcatatgttggcacctacaaaagcgtcgcatttgtcgcaattattgggatgataggc
tattcagcaatggatgctttatttattcaattaatgaagccgtttattgatcaaggtttg
aaccagcgtaatacagaagttttaaagtacgctccttttgtcgttatcgcgttagttcta
gggcgtggtgtttttaactttatgtcttcctactgcttaagttatgtaggctcccaagtt
gtacgttctttacgccaagagttatttgagcacatattgcacttacccgtttcttttcat
gacaaaaactcaacgggagatttaatttcaaaaatcacatttgatacagaacaagttcaa
caagcgattactaaagccttgctaatagtcgtacgtgaaggggcatttgttgtattttta
cttgcggtaatgttctataccagttggcaactatcactgatatttttagtgatcatccca
cttgttgctattattgtcgccgtcgtctctaaacgttttcgccacatttctaaaaacatt
caatctgccatggggcaagttacccgtagctcagaacaaatgctgagcggacataaagtt
attcacggttttggtggtcaagatcaagagattaatcacttctcgaaaattaataatcat
aatcgtcagcaacgtatcaaaatggacgcaactaaagcgcttagtgtgtctataattcaa
attttagcggcaagtgccatggcagttattttgtgggcggtgtcgttgccatcaatgatt
gatacgattacatctggtgacttcatggcattaattgcctcaatgatgatgttattacgt
ccgctaaaacaacttgccaatgtgaatagtgatatgcaacgtggtatctctgcagcgcaa
agtatatttttagttttagacgaagaaatggaaaaagatacaggcactgtttcggttgat
aaagttaaaggtttaattgaagttaagaacgtaacctttaagtacccaactaaagatgaa
gccgtattaaacgatttgtcgctaacgattgaggcgggtgaaagtattgccttagtaggg
cgctcaggctctggtaagtcaacaatttctaacttgttaccccgctattatgatttagaa
ctaccgagtgaaatattacttgatggcatagcactgcaggactataaattaactgatctg
cgtcgccaatttgctttagtgtctcagcaagttgtgttatttaacgatacgattgccaat
aatatttgttatggcataaagcacgatgtgtctgttgcagagttagagcaagttgccaaa
caagcgcacgtgtgggaatttgttaaagacctgcctgagcaattaaacaccatggtaggc
gaaaatggggtaatgctctcaggtggtcaacgccagcgaatagcgatagcgcgtgcaata
ttaaaagatgcacctattttgattttagatgaggcaacgtcagcacttgataccgaatct
gaaaagcttattcagcaagcattagaaacgttaatgaaagataaaacctctattgttata
gcacatcgcttatctactattgaaaacagtgaccgaatttatgttattgataacgggcgt
gtgatagaaagtggcgatcatagtagcttattagcaaatgacggtacttattcagcactt
tgcaaaatgcagtttggtgatcaggcgtga

All links

Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (20)   

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