KEGG   Pseudoalteromonas arctica: PARC_a2487
Entry
PARC_a2487        CDS       T05179                                 
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V gamma subunit
  KO
K03583  exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
Organism
part  Pseudoalteromonas arctica
Pathway
part03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:part00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    PARC_a2487 (recC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:part03400]
    PARC_a2487 (recC)
Enzymes [BR:part01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     PARC_a2487 (recC)
DNA repair and recombination proteins [BR:part03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     PARC_a2487 (recC)
SSDB
Motif
Pfam: Exonuc_V_gamma RecC_C
Other DBs
NCBI-ProteinID: ATC86971
UniProt: A0A290S7J1
Position
I:complement(2410625..2413924)
AA seq 1099 aa
MLNIIQSNRMEALQAQFHQLLKVNPLQSPFDKEVVLVQSPGMSQWLKIGLSENLGVAAQV
DFPLPSSFIWQLYQQLLPNVPKESAFNKPNLAWKLFAILPICIDEPLYLPLKTYLEGDID
GQKTFALCEKIADVYDQYLMYRPHWIATWDSGKDELDDVDVTIAPWQPDLWRRIVKLSQD
LGQSQFHRANMQGQLLAALETMDNSLLPQRISLFGISAIASSQLEVFEALSKKTEVILFF
FNPSEHYWGDIIDEKTAAKISAKYAKMPLVEAQQKKQTNPDEEYYFIGNPLLSSWGKLGR
DYFEQLVQLDARWIDGFIDVFDDTLLGQVQSEIYQLAFKGESLTDNKEWFINDEGKLPIS
ATDTSITLSDCHTPLREVERLHDYLLNLFNQNPTLTPKDIIVMMPDVGTYSPYIEAVFGG
AQGSRFIPYALADLAIEQEKPVLSSFASLANLPFSRFGVSDILDLLQVTQIAEKFGLEAH
EYEQIQYWLERVGVKWGINAAHKSSFDLPAIDLNTWQHGLNRLLLGIAMRDEQCPFNGIY
SADEVEGMALDTLNKLVHFIDVLQSFKEQLTPDDTLTNKAHILSELLNAIYESESDDSWD
LLVLQNVLEELQKHHDNGDYSKAVSQRIVSYLVKQGIQEKGVGQRFLVGQVNFCTLMPMR
AVPFKVVCMLGLNDADYPRNVQPIGFDLVPYSKKQKGDRSRKLDDRYLFLEALLSARDNL
YMSYIGRSCFDNQPRMPSTLVSELLEYIGRSFVLSDKSEKTLPACLINQQHLQPFNSHYY
LADEQANTVLSNHSYNPIWLPSESIKPEPVIALDVTVPEQLDLDVFIRSVCSAQESFYQQ
TLGLRLPQFNEVAKDEEPFSLDALRRYFYLDEILKANINEQPLSTEQILQRGELPQANVG
SLIFESMEHRVDALAGQVKEHIKGGKSEPIEVLLTIEGTKIEGWLNHVYLQKQVFYRSAS
IKAKDLIKGFIYHLAAQSMDQQVETLLLGLDKQITFAPINKADADALLLDWFELYKALRA
EPVPFFPVSGYEYVKSGGDIIKAMSKFSPQYIGRGEGENPYIRLTVQSLNDCQEEFIKWS
DKLLTPLFEHAKESDHASA
NT seq 3300 nt   +upstreamnt  +downstreamnt
atgctaaatattattcaatcaaaccggatggaagccctgcaagcgcagttccaccagctg
ttaaaagtaaacccattgcaaagcccgttcgacaaagaagtagtgctagtgcaatcgccg
ggtatgtcgcagtggttaaaaataggtttgagcgaaaacttaggggttgcggcgcaggta
gattttccgctgccgtcgagctttatttggcagttgtatcagcaattactgccaaatgtc
cctaaagagtcggcatttaataagcccaaccttgcttggaagctgtttgccattttaccc
atctgtattgatgagccgctatatttaccgctaaaaacctatttagagggcgatattgac
gggcaaaaaacctttgcgttatgcgaaaaaatagccgatgtgtacgaccaatatttaatg
taccgaccgcactggatagccacatgggatagcggcaaagatgagcttgatgacgtagat
gtaaccattgccccatggcagcctgacttatggcgacgcattgtaaaactaagccaagac
cttgggcaaagccaatttcatcgcgctaatatgcaagggcagttactagcagcacttgag
actatggacaatagcttactgccacaacgcattagtttatttggtatatcggcgattgcc
agctcccagcttgaggtgtttgaagcgctgagtaaaaaaaccgaggttatattattcttt
tttaacccaagtgagcattactggggcgatattatagatgaaaaaacagcagctaaaata
agcgctaaatacgccaaaatgccgctggtggaagcgcaacaaaaaaaacaaaccaaccca
gatgaagaatactactttataggtaatccgttgttatcgtcgtggggtaaattaggtcgc
gactattttgaacaacttgtacagttagatgcccgttggattgatggttttattgatgtg
tttgacgacaccttgctagggcaagtacaaagcgagatttatcagcttgcgtttaaaggc
gaatcactgaccgataacaaagagtggtttataaacgacgaaggtaaattaccaatcagc
gcaaccgacaccagtattacgctcagcgattgccatacaccgcttagagaagttgagcgc
ttgcacgactacttacttaacttgtttaatcaaaacccaacgcttacccccaaagacata
attgtcatgatgcccgatgtaggcacttacagcccttatattgaagccgtatttggcggg
gcacaaggcagccgctttattccttacgcattggccgatttagccatagagcaagaaaag
cctgtccttagttcatttgcgagtttagctaacttaccgttttcgcgctttggtgtgtcg
gatattctcgatttattacaagtgacgcaaatagccgaaaaatttgggcttgaagcacac
gaatatgagcaaattcaatactggcttgaacgtgtaggggttaaatggggtataaacgca
gcgcataaaagcagctttgatttgcccgctatcgatttaaatacctggcaacatgggctc
aaccgtttactgcttggtattgccatgcgcgacgaacaatgcccttttaacggcatttac
agcgctgatgaagtagaaggtatggcgcttgatacactcaataagctcgtgcactttatt
gatgtactgcaaagctttaaagagcagctaacgcccgacgatacgctcactaataaagcg
catattttaagcgagctattaaacgccatatacgaaagtgaaagcgacgacagctgggat
ttattagtacttcaaaacgtgctcgaagagttacaaaaacaccacgacaacggcgattac
agcaaggcggtttcgcagcgtattgttagttacttagttaaacaaggcattcaagaaaaa
ggtgtagggcagcggtttttggtcgggcaagtaaacttttgtacgcttatgcccatgcgc
gccgtgccatttaaagtggtatgtatgctgggcttaaatgatgccgactacccacgtaac
gtacaacccattggttttgacttagtgccttactctaaaaagcaaaaaggtgaccgatca
cgtaaattagatgaccgttacttatttttagaagcgctattgagtgcccgcgacaaccta
tacatgagttacattggtcgctcgtgttttgataaccaaccgcgcatgccatcaacgctt
gtaagtgagctgttagagtatattgggcgtagttttgtattaagcgataaaagcgaaaaa
acgctgcccgcatgtctaatcaatcagcagcatttacagccctttaatagccattattac
ttagccgatgagcaagccaatactgtgctgagcaaccacagttacaatccaatttggctg
ccaagtgagtcaattaaaccagagccagttattgcacttgatgtgactgtgccagagcag
ctagatctagatgtgtttattagaagtgtgtgcagcgcacaagagagcttttatcagcaa
acattaggtttacgcctgccacaatttaacgaagtagcaaaagacgaagagccatttagt
ttagatgcgctgcgccgttatttttaccttgatgaaatacttaaagccaatataaacgag
caaccactaagtaccgagcaaatactgcagcggggtgagttacctcaagctaatgtaggc
agcctcatatttgaaagtatggagcaccgagttgatgcgcttgcagggcaagtaaaagag
catattaaaggcgggaaaagtgagccaatagaagttttgcttaccattgaaggcactaaa
atagagggctggctcaatcatgtgtatttgcaaaaacaagtgttttaccgcagtgcgagt
attaaagcgaaagatttaattaaaggctttatttatcacctcgcagcgcaaagtatggat
caacaagtagaaacattgttacttgggctcgataagcaaattacctttgcgccaattaat
aaagctgatgccgatgcattgctgcttgattggtttgagttatacaaagcactgcgcgca
gagcctgtgccattttttccggtaagtggttatgagtacgttaaaagcggcggcgatata
ataaaagcaatgagcaaatttagcccgcaatacatagggcgaggcgagggcgaaaacccg
tatattcgcttaacggtgcaatcgctaaacgactgccaagaagaatttataaaatggagt
gataaattgctcacgcctttatttgaacacgcaaaggagagtgaccatgcaagcgcttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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