KEGG   PATHWAY: cdi00970
Entry
cdi00970                    Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Corynebacterium diphtheriae NCTC 13129
Class
Genetic Information Processing; Translation
Pathway map
cdi00970  Aminoacyl-tRNA biosynthesis
cdi00970

Organism
Corynebacterium diphtheriae NCTC 13129 [GN:cdi]
Gene
tRNA-Ala-1  tRNA-Ala; tRNA-Ala [KO:K14218]
tRNA-Ala-3  tRNA-Ala; tRNA-Ala [KO:K14218]
tRNA-Ala-2  tRNA-Ala; tRNA-Ala [KO:K14218]
tRNA-Ala-4  tRNA-Ala; tRNA-Ala [KO:K14218]
tRNA-Arg-4  tRNA-Arg; tRNA-Arg [KO:K14219]
tRNA-Arg-1  tRNA-Arg; tRNA-Arg [KO:K14219]
tRNA-Arg-2  tRNA-Arg; tRNA-Arg [KO:K14219]
tRNA-Arg-5  tRNA-Arg; tRNA-Arg [KO:K14219]
tRNA-Arg-6  tRNA-Arg; tRNA-Arg [KO:K14219]
tRNA-Arg-3  tRNA-Arg; tRNA-Arg [KO:K14219]
tRNA-Asn  tRNA-Asn; tRNA-Asn [KO:K14220]
tRNA-Asp-1  tRNA-Asp; tRNA-Asp [KO:K14221]
tRNA-Asp-2  tRNA-Asp; tRNA-Asp [KO:K14221]
tRNA-Cys  tRNA-Cys; tRNA-Cys [KO:K14222]
tRNA-Gln-2  tRNA-Gln; tRNA-Gln [KO:K14223]
tRNA-Gln-1  tRNA-Gln; tRNA-Gln [KO:K14223]
tRNA-Glu-1  tRNA-Glu; tRNA-Glu [KO:K14224]
tRNA-Glu-2  tRNA-Glu; tRNA-Glu [KO:K14224]
tRNA-Glu-3  tRNA-Glu; tRNA-Glu [KO:K14224]
tRNA-Gly-1  tRNA-Gly; tRNA-Gly [KO:K14225]
tRNA-Gly-2  tRNA-Gly; tRNA-Gly [KO:K14225]
tRNA-Gly-3  tRNA-Gly; tRNA-Gly [KO:K14225]
tRNA-Gly-4  tRNA-Gly; tRNA-Gly [KO:K14225]
tRNA-Gly-5  tRNA-Gly; tRNA-Gly [KO:K14225]
tRNA-His  tRNA-His; tRNA-His [KO:K14226]
tRNA-Ile-1  tRNA-Ile; tRNA-Ile [KO:K14227]
tRNA-Ile-2  tRNA-Ile; tRNA-Ile [KO:K14227]
tRNA-Leu-5  tRNA-Leu; tRNA-Leu [KO:K14228]
tRNA-Leu-3  tRNA-Leu; tRNA-Leu [KO:K14228]
tRNA-Leu-1  tRNA-Leu; tRNA-Leu [KO:K14228]
tRNA-Leu-2  tRNA-Leu; tRNA-Leu [KO:K14228]
tRNA-Leu-4  tRNA-Leu; tRNA-Leu [KO:K14228]
tRNA-Lys-1  tRNA-Lys; tRNA-Lys [KO:K14229]
tRNA-Lys-2  tRNA-Lys; tRNA-Lys [KO:K14229]
tRNA-Met-1  tRNA-Met; tRNA-Met [KO:K14230]
tRNA-Met-2  tRNA-Met; tRNA-Met [KO:K14230]
tRNA-Met-3  tRNA-Met; tRNA-Met [KO:K14230]
tRNA-Phe  tRNA-Phe; tRNA-Phe [KO:K14231]
tRNA-Pro-3  tRNA-Pro; tRNA-Pro [KO:K14232]
tRNA-Pro-2  tRNA-Pro; tRNA-Pro [KO:K14232]
tRNA-Pro-1  tRNA-Pro; tRNA-Pro [KO:K14232]
tRNA-Ser-1  tRNA-Ser; tRNA-Ser [KO:K14233]
tRNA-Ser-3  tRNA-Ser; tRNA-Ser [KO:K14233]
tRNA-Ser-2  tRNA-Ser; tRNA-Ser [KO:K14233]
tRNA-Ser-4  tRNA-Ser; tRNA-Ser [KO:K14233]
tRNA-Thr-2  tRNA-Thr; tRNA-Thr [KO:K14234]
tRNA-Thr-1  tRNA-Thr; tRNA-Thr [KO:K14234]
tRNA-Thr-3  tRNA-Thr; tRNA-Thr [KO:K14234]
tRNA-Trp  tRNA-Trp; tRNA-Trp [KO:K14235]
tRNA-Tyr  tRNA-Tyr; tRNA-Tyr [KO:K14236]
tRNA-Val-2  tRNA-Val; tRNA-Val [KO:K14237]
tRNA-Val-3  tRNA-Val; tRNA-Val [KO:K14237]
tRNA-Val-1  tRNA-Val; tRNA-Val [KO:K14237]
tRNA-Val-4  tRNA-Val; tRNA-Val [KO:K14237]
DIP0252  Putative glutamyl-tRNA synthetase [KO:K01885] [EC:6.1.1.17]
DIP1115  gltX; glutamyl-tRNA synthetase [KO:K01885] [EC:6.1.1.17]
DIP1080  gatA; glutamyl-tRNA(Gln) amidotransferase subunit A [KO:K02433] [EC:6.3.5.6 6.3.5.7]
DIP1089  gatB; glutamyl-tRNA(Gln) amidotransferase subunit B [KO:K02434] [EC:6.3.5.6 6.3.5.7]
DIP1079  gatC; glutamyl-tRNA(Gln) amidotransferase subunit C [KO:K02435] [EC:6.3.5.6 6.3.5.7]
DIP1350  alaS; alanyl-tRNA synthetase [KO:K01872] [EC:6.1.1.7]
DIP1353  aspS; aspartyl-tRNA synthetase [KO:K01876] [EC:6.1.1.12]
DIP1708  glyS; glycyl-tRNA synthetase [KO:K01880] [EC:6.1.1.14]
DIP1388  thrS; threonyl-tRNA synthetase [KO:K01868] [EC:6.1.1.3]
DIP2240  serS; seryl-tRNA synthetase [KO:K01875] [EC:6.1.1.11]
DIP1971  cysS1; Putative cysteinyl-tRNA synthetase [KO:K01883] [EC:6.1.1.16]
DIP0872  metG; methionyl-tRNA synthetase [KO:K01874] [EC:6.1.1.10]
DIP1322  fmt; methionyl-tRNA formyltransferase [KO:K00604] [EC:2.1.2.9]
DIP1786  valS; valyl-tRNA synthetase [KO:K01873] [EC:6.1.1.9]
DIP2320  leuS; leucyl-tRNA synthetase [KO:K01869] [EC:6.1.1.4]
DIP1589  ileS; isoleucyl-tRNA synthetase [KO:K01870] [EC:6.1.1.5]
DIP1987  lysU; Putative lysyl-tRNA synthetase [KO:K04567] [EC:6.1.1.6]
DIP2138  Putative integral membrane protein/lysyl-tRNA synthetase fusion [KO:K04567] [EC:6.1.1.6]
DIP1034  argS; arginyl-tRNA synthetase [KO:K01887] [EC:6.1.1.19]
DIP1482  proS; prolyl-tRNA synthetase [KO:K01881] [EC:6.1.1.15]
DIP1360  hisS; histidyl-tRNA synthetase [KO:K01892] [EC:6.1.1.21]
DIP1165  pheS; phenylalanyl-tRNA synthetase alpha chain [KO:K01889] [EC:6.1.1.20]
DIP1166  pheT; phenylalanyl-tRNA synthetase beta chain [KO:K01890] [EC:6.1.1.20]
DIP1176  tyrS; tyrosyl-tRNA synthetase [KO:K01866] [EC:6.1.1.1]
DIP0635  trpS; tryptophanyl-tRNA synthetase [KO:K01867] [EC:6.1.1.2]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
cdi00250  Alanine, aspartate and glutamate metabolism
cdi00260  Glycine, serine and threonine metabolism
cdi00270  Cysteine and methionine metabolism
cdi00290  Valine, leucine and isoleucine biosynthesis
cdi00300  Lysine biosynthesis
cdi00330  Arginine and proline metabolism
cdi00340  Histidine metabolism
cdi00380  Tryptophan metabolism
cdi00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (79)   
   KEGG GENES (79)   
All databases (80)   

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