KEGG   PATHWAY: cqu00020
Entry
cqu00020                    Pathway                                
Name
Citrate cycle (TCA cycle) - Culex quinquefasciatus (southern house mosquito)
Description
The citrate cycle (TCA cycle, Krebs cycle) is an important aerobic pathway for the final steps of the oxidation of carbohydrates and fatty acids. The cycle starts with acetyl-CoA, the activated form of acetate, derived from glycolysis and pyruvate oxidation for carbohydrates and from beta oxidation of fatty acids. The two-carbon acetyl group in acetyl-CoA is transferred to the four-carbon compound of oxaloacetate to form the six-carbon compound of citrate. In a series of reactions two carbons in citrate are oxidized to CO2 and the reaction pathway supplies NADH for use in the oxidative phosphorylation and other metabolic processes. The pathway also supplies important precursor metabolites including 2-oxoglutarate. At the end of the cycle the remaining four-carbon part is transformed back to oxaloacetate. According to the genome sequence data, many organisms seem to lack genes for the full cycle [MD:M00009], but contain genes for specific segments [MD:M00010 M00011].
Class
Metabolism; Carbohydrate metabolism
Pathway map
cqu00020  Citrate cycle (TCA cycle)
cqu00020

Module
cqu_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:cqu00020]
cqu_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:cqu00020]
cqu_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:cqu00020]
cqu_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:cqu00020]
cqu_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:cqu00020]
Other DBs
GO: 0006099
Organism
Culex quinquefasciatus (southern house mosquito) [GN:cqu]
Gene
CpipJ_CPIJ019861  citrate synthase, mitochondrial [KO:K01647] [EC:2.3.3.1]
CpipJ_CPIJ010291  citrate synthase, mitochondrial [KO:K01647] [EC:2.3.3.1]
CpipJ_CPIJ000859  ATP-citrate synthase [KO:K01648] [EC:2.3.3.8]
CpipJ_CPIJ002118  iron-responsive element-binding protein 1 [KO:K01681] [EC:4.2.1.3]
CpipJ_CPIJ000337  isocitrate dehydrogenase cytoplasmic [KO:K00031] [EC:1.1.1.42]
CpipJ_CPIJ003304  isocitrate dehydrogenase [KO:K00031] [EC:1.1.1.42]
CpipJ_CPIJ009491  isocitrate dehydrogenase [KO:K00030] [EC:1.1.1.41]
CpipJ_CPIJ002859  isocitrate dehydrogenase [KO:K00030] [EC:1.1.1.41]
CpipJ_CPIJ007338  conserved hypothetical protein [KO:K00164] [EC:1.2.4.2]
CpipJ_CPIJ004049  dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase [KO:K00658] [EC:2.3.1.61]
CpipJ_CPIJ019726  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
CpipJ_CPIJ013983  dihydrolipoyl dehydrogenase, mitochondrial [KO:K00382] [EC:1.8.1.4]
CpipJ_CPIJ018673  succinyl-CoA ligase subunit alpha [KO:K01899] [EC:6.2.1.4 6.2.1.5]
CpipJ_CPIJ006157  succinyl-coa synthetase beta chain [KO:K01900] [EC:6.2.1.4 6.2.1.5]
CpipJ_CPIJ005779  succinyl-CoA ligase beta-chain, mitochondrial [KO:K01900] [EC:6.2.1.4 6.2.1.5]
CpipJ_CPIJ006167  succinate dehydrogenase flavoprotein subunit, mitochondrial [KO:K00234] [EC:1.3.5.1]
CpipJ_CPIJ017679  succinate dehydrogenase [KO:K00235] [EC:1.3.5.1]
CpipJ_CPIJ011179  mitochondrial succinate dehydrogenase cytochrome b subunit [KO:K00236]
CpipJ_CPIJ003756  succinate dehydrogenase [KO:K00237]
CpipJ_CPIJ004125  succinate dehydrogenase [KO:K00237]
CpipJ_CPIJ008384  aspartate ammonia lyase [KO:K01679] [EC:4.2.1.2]
CpipJ_CPIJ002460  malate dehydrogenase [KO:K00025] [EC:1.1.1.37]
CpipJ_CPIJ008366  mitochondrial malate dehydrogenase 2 [KO:K00026] [EC:1.1.1.37]
CpipJ_CPIJ003657  conserved hypothetical protein [KO:K00026] [EC:1.1.1.37]
CpipJ_CPIJ013869  malate dehydrogenase [KO:K00026] [EC:1.1.1.37]
CpipJ_CPIJ002514  pyruvate carboxylase, mitochondrial [KO:K01958] [EC:6.4.1.1]
CpipJ_CPIJ010515  phosphoenolpyruvate carboxykinase [KO:K01596] [EC:4.1.1.32]
CpipJ_CPIJ010516  phosphoenolpyruvate carboxykinase [KO:K01596] [EC:4.1.1.32]
CpipJ_CPIJ010518  phosphoenolpyruvate carboxykinase [KO:K01596] [EC:4.1.1.32]
CpipJ_CPIJ004390  pyruvate dehydrogenase [KO:K00161] [EC:1.2.4.1]
CpipJ_CPIJ001456  pyruvate dehydrogenase E1 component subunit alpha [KO:K00161] [EC:1.2.4.1]
CpipJ_CPIJ014889  pyruvate dehydrogenase [KO:K00161] [EC:1.2.4.1]
CpipJ_CPIJ016430  pyruvate dehydrogenase [KO:K00162] [EC:1.2.4.1]
CpipJ_CPIJ016647  dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase [KO:K00627] [EC:2.3.1.12]
CpipJ_CPIJ014073  dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase [KO:K00627] [EC:2.3.1.12]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00026  2-Oxoglutarate
C00036  Oxaloacetate
C00042  Succinate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00091  Succinyl-CoA
C00122  Fumarate
C00149  (S)-Malate
C00158  Citrate
C00311  Isocitrate
C00417  cis-Aconitate
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C05379  Oxalosuccinate
C05381  3-Carboxy-1-hydroxypropyl-ThPP
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16254  [Dihydrolipoyllysine-residue succinyltransferase] S-succinyldihydrolipoyllysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
cqu00010  Glycolysis / Gluconeogenesis
cqu00053  Ascorbate and aldarate metabolism
cqu00061  Fatty acid biosynthesis
cqu00062  Fatty acid elongation
cqu00071  Fatty acid degradation
cqu00190  Oxidative phosphorylation
cqu00220  Arginine biosynthesis
cqu00250  Alanine, aspartate and glutamate metabolism
cqu00280  Valine, leucine and isoleucine degradation
cqu00350  Tyrosine metabolism
cqu00470  D-Amino acid metabolism
cqu00630  Glyoxylate and dicarboxylate metabolism
KO pathway
ko00020   

DBGET integrated database retrieval system