KEGG   PATHWAY: eca01100
Entry
eca01100                    Pathway                                
Name
Metabolic pathways - Pectobacterium atrosepticum SCRI1043
Class
Pathway map
eca01100  Metabolic pathways
eca01100

Module
eca_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:eca01100]
eca_M00002  Glycolysis, core module involving three-carbon compounds [PATH:eca01100]
eca_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:eca01100]
eca_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:eca01100]
eca_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:eca01100]
eca_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:eca01100]
eca_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:eca01100]
eca_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:eca01100]
eca_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:eca01100]
eca_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:eca01100]
eca_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:eca01100]
eca_M00012  Glyoxylate cycle [PATH:eca01100]
eca_M00015  Proline biosynthesis, glutamate => proline [PATH:eca01100]
eca_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:eca01100]
eca_M00017  Methionine biosynthesis, aspartate => homoserine => methionine [PATH:eca01100]
eca_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:eca01100]
eca_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:eca01100]
eca_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:eca01100]
eca_M00021  Cysteine biosynthesis, serine => cysteine [PATH:eca01100]
eca_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:eca01100]
eca_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:eca01100]
eca_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:eca01100]
eca_M00025  Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:eca01100]
eca_M00026  Histidine biosynthesis, PRPP => histidine [PATH:eca01100]
eca_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:eca01100]
eca_M00034  Methionine salvage pathway [PATH:eca01100]
eca_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:eca01100]
eca_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:eca01100]
eca_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:eca01100]
eca_M00051  De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:eca01100]
eca_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:eca01100]
eca_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:eca01100]
eca_M00060  KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:eca01100]
eca_M00061  D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:eca01100]
eca_M00063  CMP-KDO biosynthesis [PATH:eca01100]
eca_M00064  ADP-L-glycero-D-manno-heptose biosynthesis [PATH:eca01100]
eca_M00082  Fatty acid biosynthesis, initiation [PATH:eca01100]
eca_M00083  Fatty acid biosynthesis, elongation [PATH:eca01100]
eca_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:eca01100]
eca_M00087  beta-Oxidation [PATH:eca01100]
eca_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:eca01100]
eca_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:eca01100]
eca_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:eca01100]
eca_M00116  Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:eca01100]
eca_M00117  Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:eca01100]
eca_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:eca01100]
eca_M00119  Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:eca01100]
eca_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:eca01100]
eca_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:eca01100]
eca_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:eca01100]
eca_M00124  Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:eca01100]
eca_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:eca01100]
eca_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:eca01100]
eca_M00127  Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:eca01100]
eca_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:eca01100]
eca_M00149  Succinate dehydrogenase, prokaryotes [PATH:eca01100]
eca_M00150  Fumarate reductase, prokaryotes [PATH:eca01100]
eca_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:eca01100]
eca_M00168  CAM (Crassulacean acid metabolism), dark [PATH:eca01100]
eca_M00175  Nitrogen fixation, nitrogen => ammonia [PATH:eca01100]
eca_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:eca01100]
eca_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:eca01100]
eca_M00364  C10-C20 isoprenoid biosynthesis, bacteria [PATH:eca01100]
eca_M00417  Cytochrome o ubiquinol oxidase [PATH:eca01100]
eca_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:eca01100]
eca_M00530  Dissimilatory nitrate reduction, nitrate => ammonia [PATH:eca01100]
eca_M00531  Assimilatory nitrate reduction, nitrate => ammonia [PATH:eca01100]
eca_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:eca01100]
eca_M00552  D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:eca01100]
eca_M00554  Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:eca01100]
eca_M00555  Betaine biosynthesis, choline => betaine [PATH:eca01100]
eca_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:eca01100]
eca_M00572  Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:eca01100]
eca_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:eca01100]
eca_M00621  Glycine cleavage system [PATH:eca01100]
eca_M00631  D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:eca01100]
eca_M00632  Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:eca01100]
eca_M00761  Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:eca01100]
eca_M00793  dTDP-L-rhamnose biosynthesis [PATH:eca01100]
eca_M00844  Arginine biosynthesis, ornithine => arginine [PATH:eca01100]
eca_M00846  Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:eca01100]
eca_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:eca01100]
eca_M00855  Glycogen degradation, glycogen => glucose-6P [PATH:eca01100]
eca_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:eca01100]
eca_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:eca01100]
eca_M00899  Thiamine salvage pathway, HMP/HET => TMP [PATH:eca01100]
eca_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:eca01100]
eca_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:eca01100]
eca_M00970  Proline degradation, proline => glutamate [PATH:eca01100]
Organism
Pectobacterium atrosepticum SCRI1043 [GN:eca]
Related
pathway
eca00010  Glycolysis / Gluconeogenesis
eca00020  Citrate cycle (TCA cycle)
eca00030  Pentose phosphate pathway
eca00040  Pentose and glucuronate interconversions
eca00051  Fructose and mannose metabolism
eca00052  Galactose metabolism
eca00053  Ascorbate and aldarate metabolism
eca00061  Fatty acid biosynthesis
eca00071  Fatty acid degradation
eca00130  Ubiquinone and other terpenoid-quinone biosynthesis
eca00190  Oxidative phosphorylation
eca00220  Arginine biosynthesis
eca00230  Purine metabolism
eca00240  Pyrimidine metabolism
eca00250  Alanine, aspartate and glutamate metabolism
eca00260  Glycine, serine and threonine metabolism
eca00261  Monobactam biosynthesis
eca00270  Cysteine and methionine metabolism
eca00280  Valine, leucine and isoleucine degradation
eca00290  Valine, leucine and isoleucine biosynthesis
eca00300  Lysine biosynthesis
eca00310  Lysine degradation
eca00330  Arginine and proline metabolism
eca00332  Carbapenem biosynthesis
eca00340  Histidine metabolism
eca00350  Tyrosine metabolism
eca00360  Phenylalanine metabolism
eca00361  Chlorocyclohexane and chlorobenzene degradation
eca00362  Benzoate degradation
eca00364  Fluorobenzoate degradation
eca00380  Tryptophan metabolism
eca00400  Phenylalanine, tyrosine and tryptophan biosynthesis
eca00401  Novobiocin biosynthesis
eca00405  Phenazine biosynthesis
eca00410  beta-Alanine metabolism
eca00430  Taurine and hypotaurine metabolism
eca00440  Phosphonate and phosphinate metabolism
eca00450  Selenocompound metabolism
eca00460  Cyanoamino acid metabolism
eca00470  D-Amino acid metabolism
eca00480  Glutathione metabolism
eca00500  Starch and sucrose metabolism
eca00511  Other glycan degradation
eca00520  Amino sugar and nucleotide sugar metabolism
eca00521  Streptomycin biosynthesis
eca00523  Polyketide sugar unit biosynthesis
eca00525  Acarbose and validamycin biosynthesis
eca00540  Lipopolysaccharide biosynthesis
eca00541  O-Antigen nucleotide sugar biosynthesis
eca00542  O-Antigen repeat unit biosynthesis
eca00543  Exopolysaccharide biosynthesis
eca00550  Peptidoglycan biosynthesis
eca00552  Teichoic acid biosynthesis
eca00561  Glycerolipid metabolism
eca00562  Inositol phosphate metabolism
eca00564  Glycerophospholipid metabolism
eca00565  Ether lipid metabolism
eca00591  Linoleic acid metabolism
eca00592  alpha-Linolenic acid metabolism
eca00600  Sphingolipid metabolism
eca00620  Pyruvate metabolism
eca00621  Dioxin degradation
eca00622  Xylene degradation
eca00623  Toluene degradation
eca00625  Chloroalkane and chloroalkene degradation
eca00626  Naphthalene degradation
eca00627  Aminobenzoate degradation
eca00630  Glyoxylate and dicarboxylate metabolism
eca00633  Nitrotoluene degradation
eca00640  Propanoate metabolism
eca00650  Butanoate metabolism
eca00660  C5-Branched dibasic acid metabolism
eca00670  One carbon pool by folate
eca00680  Methane metabolism
eca00730  Thiamine metabolism
eca00740  Riboflavin metabolism
eca00750  Vitamin B6 metabolism
eca00760  Nicotinate and nicotinamide metabolism
eca00770  Pantothenate and CoA biosynthesis
eca00780  Biotin metabolism
eca00785  Lipoic acid metabolism
eca00790  Folate biosynthesis
eca00791  Atrazine degradation
eca00860  Porphyrin metabolism
eca00900  Terpenoid backbone biosynthesis
eca00903  Limonene degradation
eca00907  Pinene, camphor and geraniol degradation
eca00910  Nitrogen metabolism
eca00920  Sulfur metabolism
eca00930  Caprolactam degradation
eca00946  Degradation of flavonoids
eca00997  Biosynthesis of various other secondary metabolites
eca00998  Biosynthesis of various antibiotics
eca00999  Biosynthesis of various plant secondary metabolites
eca01040  Biosynthesis of unsaturated fatty acids
eca01053  Biosynthesis of siderophore group nonribosomal peptides
KO pathway
ko01100   

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Genome (1)   
   KEGG GENOME (1)   
Gene (822)   
   KEGG GENES (822)   
All databases (823)   

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