KEGG   PATHWAY: ndi03050
Entry
ndi03050                    Pathway                                
Name
Proteasome - Naumovozyma dairenensis
Description
The proteasome is a protein-destroying apparatus involved in many essential cellular functions, such as regulation of cell cycle, cell differentiation, signal transduction pathways, antigen processing for appropriate immune responses, stress signaling, inflammatory responses, and apoptosis. It is capable of degrading a variety of cellular proteins in a rapid and timely fashion and most substrate proteins are modified by ubiquitin before their degradation by the proteasome. The proteasome is a large protein complex consisting of a proteolytic core called the 20S particle and ancillary factors that regulate its activity in various ways. The most common form is the 26S proteasome containing one 20S core particle and two 19S regulatory particles that enable the proteasome to degrade ubiquitinated proteins by an ATP-dependent mechanism. Another form is the immunoproteasome containing two 11S regulatory particles, PA28 alpha and PA28 beta, which are induced by interferon gamma under the conditions of intensified immune response. Other regulatory particles include PA28 gamma and PA200. Although PA28 gamma also belongs to a family of activators of the 20S proteasome, it is localized within the nucleus and forms a homoheptamer. PA28 gamma has been implicated in the regulation of cell cycle progression and apoptosis. PA200 has been identified as a large nuclear protein that stimulates proteasomal hydrolysis of peptides.
Class
Genetic Information Processing; Folding, sorting and degradation
Pathway map
ndi03050  Proteasome
ndi03050

Other DBs
GO: 0000502
Organism
Naumovozyma dairenensis [GN:ndi]
Gene
NDAI_0D00290  NDAI0D00290; hypothetical protein [KO:K03033]
NDAI_0B01040  NDAI0B01040; hypothetical protein [KO:K06693]
NDAI_0A02070  NDAI0A02070; hypothetical protein [KO:K03035]
NDAI_0B03230  NDAI0B03230; hypothetical protein [KO:K03036]
NDAI_0A04790  NDAI0A04790; hypothetical protein [KO:K03037]
NDAI_0K01140  NDAI0K01140; hypothetical protein [KO:K03038]
NDAI_0H01630  NDAI0H01630; hypothetical protein [KO:K03039]
NDAI_0B02130  NDAI0B02130; hypothetical protein [KO:K03030]
NDAI_0B06340  NDAI0B06340; hypothetical protein [KO:K03031]
NDAI_0B05610  NDAI0B05610; hypothetical protein [KO:K10881]
NDAI_0D03350  NDAI0D03350; hypothetical protein [KO:K03029]
NDAI_0D01790  NDAI0D01790; hypothetical protein [KO:K03028]
NDAI_0A03100  NDAI0A03100; hypothetical protein [KO:K03032]
NDAI_0J02600  NDAI0J02600; hypothetical protein [KO:K06691]
NDAI_0C03780  NDAI0C03780; hypothetical protein [KO:K03061]
NDAI_0A07290  NDAI0A07290; hypothetical protein [KO:K03062]
NDAI_0D02850  NDAI0D02850; hypothetical protein [KO:K03066]
NDAI_0E01020  NDAI0E01020; hypothetical protein [KO:K03064]
NDAI_0B05620  NDAI0B05620; hypothetical protein [KO:K03065]
NDAI_0A04290  NDAI0A04290; hypothetical protein [KO:K03063]
NDAI_0G03330  NDAI0G03330; hypothetical protein [KO:K06699]
NDAI_0D03560  NDAI0D03560; hypothetical protein [KO:K02730] [EC:3.4.25.1]
NDAI_0E00160  NDAI0E00160; hypothetical protein [KO:K02726] [EC:3.4.25.1]
NDAI_0G00890  NDAI0G00890; hypothetical protein [KO:K02728] [EC:3.4.25.1]
NDAI_0H01520  NDAI0H01520; hypothetical protein [KO:K02731] [EC:3.4.25.1]
NDAI_0C03400  NDAI0C03400; hypothetical protein [KO:K02729] [EC:3.4.25.1]
NDAI_0I02640  NDAI0I02640; hypothetical protein [KO:K02725] [EC:3.4.25.1]
NDAI_0A08770  NDAI0A08770; hypothetical protein [KO:K02727] [EC:3.4.25.1]
NDAI_0C02420  NDAI0C02420; hypothetical protein [KO:K02738] [EC:3.4.25.1]
NDAI_0C01170  NDAI0C01170; hypothetical protein [KO:K02739] [EC:3.4.25.1]
NDAI_0A01690  NDAI0A01690; hypothetical protein [KO:K02735] [EC:3.4.25.1]
NDAI_0E03630  NDAI0E03630; hypothetical protein [KO:K02734] [EC:3.4.25.1]
NDAI_0A04860  NDAI0A04860; hypothetical protein [KO:K02737] [EC:3.4.25.1]
NDAI_0J00600  NDAI0J00600; hypothetical protein [KO:K02732] [EC:3.4.25.1]
NDAI_0B06310  NDAI0B06310; hypothetical protein [KO:K02736] [EC:3.4.25.1]
NDAI_0C05780  NDAI0C05780; hypothetical protein [KO:K11599]
Reference
  Authors
Hirano Y, Murata S, Tanaka K
  Title
Large- and small-scale purification of mammalian 26S proteasomes.
  Journal
Methods Enzymol 399:227-40 (2005)
DOI:10.1016/S0076-6879(05)99015-0
Reference
  Authors
Saeki Y, Tanaka K
  Title
Cell biology: two hands for degradation.
  Journal
Nature 453:460-1 (2008)
DOI:10.1038/453460a
Reference
  Authors
Smith DM, Benaroudj N, Goldberg A
  Title
Proteasomes and their associated ATPases: a destructive combination.
  Journal
J Struct Biol 156:72-83 (2006)
DOI:10.1016/j.jsb.2006.04.012
Reference
  Authors
Strehl B, Seifert U, Kruger E, Heink S, Kuckelkorn U, Kloetzel PM
  Title
Interferon-gamma, the functional plasticity of the ubiquitin-proteasome system, and MHC class I antigen processing.
  Journal
Immunol Rev 207:19-30 (2005)
DOI:10.1111/j.0105-2896.2005.00308.x
Reference
  Authors
Darwin KH
  Title
Prokaryotic ubiquitin-like protein (Pup), proteasomes and pathogenesis.
  Journal
Nat Rev Microbiol 7:485-91 (2009)
DOI:10.1038/nrmicro2148
Reference
  Authors
Tomko RJ Jr, Hochstrasser M
  Title
Molecular architecture and assembly of the eukaryotic proteasome.
  Journal
Annu Rev Biochem 82:415-45 (2013)
DOI:10.1146/annurev-biochem-060410-150257
Reference
  Authors
Budenholzer L, Cheng CL, Li Y, Hochstrasser M
  Title
Proteasome Structure and Assembly.
  Journal
J Mol Biol 429:3500-3524 (2017)
DOI:10.1016/j.jmb.2017.05.027
Reference
  Authors
Cloos J, Roeten MS, Franke NE, van Meerloo J, Zweegman S, Kaspers GJ, Jansen G
  Title
(Immuno)proteasomes as therapeutic target in acute leukemia.
  Journal
Cancer Metastasis Rev 36:599-615 (2017)
DOI:10.1007/s10555-017-9699-4
Reference
  Authors
Sakata E, Bohn S, Mihalache O, Kiss P, Beck F, Nagy I, Nickell S, Tanaka K, Saeki Y, Forster F, Baumeister W
  Title
Localization of the proteasomal ubiquitin receptors Rpn10 and Rpn13 by electron cryomicroscopy.
  Journal
Proc Natl Acad Sci U S A 109:1479-84 (2012)
DOI:10.1073/pnas.1119394109
Related
pathway
ndi04120  Ubiquitin mediated proteolysis
KO pathway
ko03050   

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