KEGG   PATHWAY: pga00230Help
Entry
pga00230                    Pathway                                

Name
Purine metabolism - Phaeobacter inhibens DSM 17395
Class
Metabolism; Nucleotide metabolism
BRITE hierarchy
Pathway map
pga00230  Purine metabolism
pga00230

Ortholog table
Module
pga_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:pga00230]
pga_M00048  Inosine monophosphate biosynthesis, PRPP + glutamine => IMP [PATH:pga00230]
pga_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:pga00230]
pga_M00050  Guanine ribonucleotide biosynthesis IMP => GDP,GTP [PATH:pga00230]
Other DBs
BSID: 662555
GO: 0042278
Organism
Phaeobacter inhibens DSM 17395 [GN:pga]
Gene
PGA1_c11950  deoB; phosphopentomutase DeoB [KO:K01839] [EC:5.4.2.7]
PGA1_c24340  algC; phosphomannomutase/phosphoglucomutase AlgC [KO:K15778] [EC:5.4.2.2 5.4.2.8]
PGA1_c25050  prs; ribose-phosphate pyrophosphokinase Prs [KO:K00948] [EC:2.7.6.1]
PGA1_c10810  purF; amidophosphoribosyltransferase PurF [KO:K00764] [EC:2.4.2.14]
PGA1_c23610  purD; phosphoribosylamine--glycine ligase PurD [KO:K01945] [EC:6.3.4.13]
PGA1_c13270  purN; phosphoribosylglycinamide formyltransferase PurN [KO:K11175] [EC:2.1.2.2]
PGA1_c13410  purS; phosphoribosylformylglycinamidine (FGAM) synthase PurS [KO:K01952] [EC:6.3.5.3]
PGA1_c13420  purQ; phosphoribosylformylglycinamidine synthase 1 [KO:K01952] [EC:6.3.5.3]
PGA1_c17120  purL; phosphoribosylformylglycinamidine synthase 2 [KO:K01952] [EC:6.3.5.3]
PGA1_c13260  purM; phosphoribosylformylglycinamidine cyclo-ligase PurM [KO:K01933] [EC:6.3.3.1]
PGA1_c24870  purK; phosphoribosylaminoimidazole carboxylase ATPase subunit PurK [KO:K01589] [EC:6.3.4.18]
PGA1_c24860  purE; phosphoribosylaminoimidazole carboxylase catalytic subunit PurE [KO:K01588] [EC:5.4.99.18]
PGA1_c13400  purC; phosphoribosylaminoimidazole-succinocarboxamide synthase PurC [KO:K01923] [EC:6.3.2.6]
PGA1_c18780  purB; adenylosuccinate lyase PurB [KO:K01756] [EC:4.3.2.2]
PGA1_c32860  purH; bifunctional purine biosynthesis protein PurH [KO:K00602] [EC:3.5.4.10 2.1.2.3]
PGA1_c06370  apt; adenine phosphoribosyltransferase Apt [KO:K00759] [EC:2.4.2.7]
PGA1_c12170  putative 5'-nucleotidase [KO:K11751] [EC:3.6.1.45 3.1.3.5]
PGA1_c10770  surE; 5'-nucleotidase SurE [KO:K03787] [EC:3.1.3.5]
PGA1_c03820  deoD; purine nucleoside phosphorylase deoD-type [KO:K03784] [EC:2.4.2.1]
PGA1_c11490  rihA; pyrimidine-specific ribonucleoside hydrolase RihA [KO:K01239] [EC:3.2.2.1]
PGA1_c14710  hpt; hypoxanthine-guanine phosphoribosyltransferase Hpt [KO:K00760] [EC:2.4.2.8]
PGA1_c15220  guaB; inosine-5'-monophosphate dehydrogenase GuaB [KO:K00088] [EC:1.1.1.205]
PGA1_c19750  ndk; nucleoside diphosphate kinase Ndk [KO:K00940] [EC:2.7.4.6]
PGA1_c35040  rdgB; nucleoside-triphosphatase RdgB [KO:K02428] [EC:3.6.1.66]
PGA1_c16830  gpt; xanthine phosphoribosyltransferase Gpt [KO:K00769] [EC:2.4.2.22]
PGA1_c28100  xdhA; xanthine dehydrogenase XdhA [KO:K13481] [EC:1.17.1.4]
PGA1_c28110  xdhB; xanthine dehydrogenase XdhB [KO:K13482] [EC:1.17.1.4]
PGA1_c14610  guaA; GMP synthase [KO:K01951] [EC:6.3.5.2]
PGA1_c21840  guaD; guanine deaminase GuaD [KO:K01487] [EC:3.5.4.3]
PGA1_c15830  gmk; guanylate kinase Gmk [KO:K00942] [EC:2.7.4.8]
PGA1_c06970  pykA; pyruvate kinase PykA [KO:K00873] [EC:2.7.1.40]
PGA1_c06940  putative adenosylcobalamin(B12)-dependent ribonucleotide reductase [KO:K00525] [EC:1.17.4.1]
PGA1_c16760  nrdJ; vitamin B12-dependent ribonucleotide reductase NrdJ [KO:K00525] [EC:1.17.4.1]
PGA1_c11120  putative deoxyguanosinetriphosphate triphosphohydrolase [KO:K01129] [EC:3.1.5.1]
PGA1_c01900  rpoA; DNA-directed RNA polymerase subunit alpha [KO:K03040] [EC:2.7.7.6]
PGA1_c01430  rpoB; DNA-directed RNA polymerase subunit beta [KO:K03043] [EC:2.7.7.6]
PGA1_c01440  rpoC; DNA-directed RNA polymerase subunit beta' [KO:K03046] [EC:2.7.7.6]
PGA1_c01000  rpoZ; DNA-directed RNA polymerase subunit omega [KO:K03060] [EC:2.7.7.6]
PGA1_c31780  polA; DNA polymerase I [KO:K02335] [EC:2.7.7.7]
PGA1_c28090  dnaE2; DNA polymerase III subunit alpha [KO:K02337] [EC:2.7.7.7]
PGA1_c00020  dnaN; DNA polymerase III subunit beta [KO:K02338] [EC:2.7.7.7]
PGA1_c22550  DNA polymerase III beta subunit-like protein [KO:K02338] [EC:2.7.7.7]
PGA1_c30260  dnaX; DNA polymerase III subunit tau [KO:K02343] [EC:2.7.7.7]
PGA1_c33420  DNA polymerase 3-like protein [KO:K02340] [EC:2.7.7.7]
PGA1_c08000  hypothetical protein [KO:K02341] [EC:2.7.7.7]
PGA1_c35170  dnaQ; DNA polymerase III subunit epsilon [KO:K02342] [EC:2.7.7.7]
PGA1_c19790  putative DNA polymerase III chi subunit, holC [KO:K02339] [EC:2.7.7.7]
PGA1_c21450  phosphatase-like protein [KO:K01524] [EC:3.6.1.40 3.6.1.11]
PGA1_c16070  guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase-like protein [KO:K01524] [EC:3.6.1.40 3.6.1.11]
PGA1_c00460  adenylate cyclase domain-containing protein [KO:K01768] [EC:4.6.1.1]
PGA1_c16620  putative adenylate cyclase [KO:K01768] [EC:4.6.1.1]
PGA1_c33560  putative adenylate and guanylate cyclase [KO:K01768] [EC:4.6.1.1]
PGA1_c32720  putative adenylate and guanylate cyclase [KO:K01768] [EC:4.6.1.1]
PGA1_c33620  hypothetical protein [KO:K01768] [EC:4.6.1.1]
PGA1_c23820  purA; adenylosuccinate synthetase PurA [KO:K01939] [EC:6.3.4.4]
PGA1_c34250  amn; AMP nucleosidase Amn [KO:K01241] [EC:3.2.2.4]
PGA1_c19080  hypothetical protein [KO:K06966] [EC:3.2.2.- 3.2.2.10]
PGA1_c36280  hypothetical protein [KO:K06966] [EC:3.2.2.- 3.2.2.10]
PGA1_c34240  ade; adenine deaminase Ade [KO:K01486] [EC:3.5.4.2]
PGA1_c30230  cpdB2; 2',3'-cyclic-nucleotide 2'-phosphodiesterase CpdB [KO:K01119] [EC:3.1.3.6 3.1.4.16]
PGA1_c18140  cpdB1; 2',3'-cyclic-nucleotide 2'-phosphodiesterase CpdB [KO:K01119] [EC:3.1.3.6 3.1.4.16]
PGA1_c12940  adk2; adenylate kinase Adk [KO:K00939] [EC:2.7.4.3]
PGA1_c01870  adk1; adenylate kinase Adk [KO:K00939] [EC:2.7.4.3]
PGA1_c33000  pnp; polyribonucleotide nucleotidyltransferase Pnp [KO:K00962] [EC:2.7.7.8]
PGA1_c30840  phosphoesterase-like protein [KO:K03651] [EC:3.1.4.53]
PGA1_c30850  phosphoesterase-like protein [KO:K03651] [EC:3.1.4.53]
PGA1_c19950  mazG; protein MazG [KO:K04765] [EC:3.6.1.9]
PGA1_c24800  putative bifunctional SAT/APS kinase [KO:K00958] [EC:2.7.7.4]
PGA1_c05470  hydroxyisourate hydrolase [KO:K07127] [EC:3.5.2.17]
PGA1_c05530  hypothetical protein [KO:K14977] [EC:3.5.3.26]
PGA1_c05490  allA; ureidoglycolate hydrolase AllA [KO:K01483] [EC:4.3.2.3]
Compound
C00002  ATP
C00008  ADP
C00011  CO2
C00014  Ammonia
C00020  AMP
C00035  GDP
C00037  Glycine
C00039  DNA
C00044  GTP
C00046  RNA
C00048  Glyoxylate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00064  L-Glutamine
C00081  ITP
C00086  Urea
C00104  IDP
C00117  D-Ribose 5-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00130  IMP
C00131  dATP
C00144  GMP
C00147  Adenine
C00169  Carbamoyl phosphate
C00206  dADP
C00209  Oxalate
C00212  Adenosine
C00224  Adenylyl sulfate
C00242  Guanine
C00262  Hypoxanthine
C00286  dGTP
C00294  Inosine
C00301  ADP-ribose
C00330  Deoxyguanosine
C00360  dAMP
C00361  dGDP
C00362  dGMP
C00366  Urate
C00385  Xanthine
C00387  Guanosine
C00499  Allantoate
C00559  Deoxyadenosine
C00575  3',5'-Cyclic AMP
C00603  (S)-Ureidoglycolate
C00620  alpha-D-Ribose 1-phosphate
C00655  Xanthosine 5'-phosphate
C00700  XTP
C00802  Oxalureate
C00942  3',5'-Cyclic GMP
C01228  Guanosine 3',5'-bis(diphosphate)
C01260  P1,P4-Bis(5'-adenosyl)tetraphosphate
C01261  P1,P4-Bis(5'-guanosyl) tetraphosphate
C01344  dIDP
C01345  dITP
C01367  3'-AMP
C01444  Oxamate
C01762  Xanthosine
C02091  (S)-Ureidoglycine
C02348  (R)(-)-Allantoin
C02350  (S)-Allantoin
C02353  2',3'-Cyclic AMP
C02718  N-Formiminoglycine
C03090  5-Phosphoribosylamine
C03373  Aminoimidazole ribotide
C03483  Adenosine tetraphosphate
C03614  Inosine 5'-tetraphosphate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03838  5'-Phosphoribosylglycinamide
C04051  5-Amino-4-imidazolecarboxyamide
C04376  5'-Phosphoribosyl-N-formylglycinamide
C04392  P1,P4-Bis(5'-xanthosyl) tetraphosphate
C04494  Guanosine 3'-diphosphate 5'-triphosphate
C04640  2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine
C04677  1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
C04734  1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide
C04751  1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate
C04823  1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
C05239  5-Aminoimidazole
C05512  Deoxyinosine
C05513  Urate-3-ribonucleoside
C05515  5-Ureido-4-imidazole carboxylate
C05516  5-Amino-4-imidazole carboxylate
C05993  Acetyl adenylate
C06193  Guanosine 3'-phosphate
C06194  2',3'-Cyclic GMP
C06195  Imidazolone
C06196  2'-Deoxyinosine 5'-phosphate
C06197  P1,P3-Bis(5'-adenosyl) triphosphate
C06433  5'-Benzoylphosphoadenosine
C06435  5'-Butyrylphosphoinosine
C11821  5-Hydroxyisourate
C12248  5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate
C15667  5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
Reference
  Authors
Cusa E, Obradors N, Baldoma L, Badia J, Aguilar J.
  Title
Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli.
  Journal
J Bacteriol 181:7479-84 (1999)
Reference
  Authors
Xi H, Schneider BL, Reitzer L.
  Title
Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage.
  Journal
J Bacteriol 182:5332-41 (2000)
DOI:10.1128/JB.182.19.5332-5341.2000
KO pathway
ko00230   

DBGET integrated database retrieval system