KEGG   PATHWAY: ppr01100
Entry
ppr01100                    Pathway                                
Name
Metabolic pathways - Photobacterium profundum
Class
Pathway map
ppr01100  Metabolic pathways
ppr01100

Module
ppr_M00002  Glycolysis, core module involving three-carbon compounds [PATH:ppr01100]
ppr_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:ppr01100]
ppr_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:ppr01100]
ppr_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:ppr01100]
ppr_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:ppr01100]
ppr_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:ppr01100]
ppr_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:ppr01100]
ppr_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:ppr01100]
ppr_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:ppr01100]
ppr_M00012  Glyoxylate cycle [PATH:ppr01100]
ppr_M00015  Proline biosynthesis, glutamate => proline [PATH:ppr01100]
ppr_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:ppr01100]
ppr_M00017  Methionine biosynthesis, aspartate => homoserine => methionine [PATH:ppr01100]
ppr_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:ppr01100]
ppr_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:ppr01100]
ppr_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:ppr01100]
ppr_M00021  Cysteine biosynthesis, serine => cysteine [PATH:ppr01100]
ppr_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:ppr01100]
ppr_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:ppr01100]
ppr_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:ppr01100]
ppr_M00025  Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:ppr01100]
ppr_M00026  Histidine biosynthesis, PRPP => histidine [PATH:ppr01100]
ppr_M00044  Tyrosine degradation, tyrosine => homogentisate [PATH:ppr01100]
ppr_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:ppr01100]
ppr_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:ppr01100]
ppr_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:ppr01100]
ppr_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:ppr01100]
ppr_M00051  De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:ppr01100]
ppr_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:ppr01100]
ppr_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:ppr01100]
ppr_M00060  KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:ppr01100]
ppr_M00061  D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:ppr01100]
ppr_M00063  CMP-KDO biosynthesis [PATH:ppr01100]
ppr_M00064  ADP-L-glycero-D-manno-heptose biosynthesis [PATH:ppr01100]
ppr_M00082  Fatty acid biosynthesis, initiation [PATH:ppr01100]
ppr_M00083  Fatty acid biosynthesis, elongation [PATH:ppr01100]
ppr_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:ppr01100]
ppr_M00087  beta-Oxidation [PATH:ppr01100]
ppr_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:ppr01100]
ppr_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:ppr01100]
ppr_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:ppr01100]
ppr_M00116  Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:ppr01100]
ppr_M00117  Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:ppr01100]
ppr_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:ppr01100]
ppr_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:ppr01100]
ppr_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:ppr01100]
ppr_M00122  Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:ppr01100]
ppr_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:ppr01100]
ppr_M00124  Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:ppr01100]
ppr_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:ppr01100]
ppr_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:ppr01100]
ppr_M00140  C1-unit interconversion, prokaryotes [PATH:ppr01100]
ppr_M00149  Succinate dehydrogenase, prokaryotes [PATH:ppr01100]
ppr_M00150  Fumarate reductase, prokaryotes [PATH:ppr01100]
ppr_M00151  Cytochrome bc1 complex respiratory unit [PATH:ppr01100]
ppr_M00155  Cytochrome c oxidase, prokaryotes [PATH:ppr01100]
ppr_M00156  Cytochrome c oxidase, cbb3-type [PATH:ppr01100]
ppr_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:ppr01100]
ppr_M00168  CAM (Crassulacean acid metabolism), dark [PATH:ppr01100]
ppr_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:ppr01100]
ppr_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:ppr01100]
ppr_M00364  C10-C20 isoprenoid biosynthesis, bacteria [PATH:ppr01100]
ppr_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:ppr01100]
ppr_M00530  Dissimilatory nitrate reduction, nitrate => ammonia [PATH:ppr01100]
ppr_M00550  Ascorbate degradation, ascorbate => D-xylulose-5P [PATH:ppr01100]
ppr_M00554  Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:ppr01100]
ppr_M00555  Betaine biosynthesis, choline => betaine [PATH:ppr01100]
ppr_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:ppr01100]
ppr_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:ppr01100]
ppr_M00621  Glycine cleavage system [PATH:ppr01100]
ppr_M00631  D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:ppr01100]
ppr_M00632  Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:ppr01100]
ppr_M00844  Arginine biosynthesis, ornithine => arginine [PATH:ppr01100]
ppr_M00846  Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:ppr01100]
ppr_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:ppr01100]
ppr_M00855  Glycogen degradation, glycogen => glucose-6P [PATH:ppr01100]
ppr_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:ppr01100]
ppr_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:ppr01100]
ppr_M00899  Thiamine salvage pathway, HMP/HET => TMP [PATH:ppr01100]
ppr_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:ppr01100]
ppr_M00959  Guanine ribonucleotide degradation, GMP => Urate [PATH:ppr01100]
ppr_M00970  Proline degradation, proline => glutamate [PATH:ppr01100]
Organism
Photobacterium profundum [GN:ppr]
Related
pathway
ppr00010  Glycolysis / Gluconeogenesis
ppr00020  Citrate cycle (TCA cycle)
ppr00030  Pentose phosphate pathway
ppr00040  Pentose and glucuronate interconversions
ppr00051  Fructose and mannose metabolism
ppr00052  Galactose metabolism
ppr00053  Ascorbate and aldarate metabolism
ppr00061  Fatty acid biosynthesis
ppr00071  Fatty acid degradation
ppr00130  Ubiquinone and other terpenoid-quinone biosynthesis
ppr00190  Oxidative phosphorylation
ppr00220  Arginine biosynthesis
ppr00230  Purine metabolism
ppr00240  Pyrimidine metabolism
ppr00250  Alanine, aspartate and glutamate metabolism
ppr00260  Glycine, serine and threonine metabolism
ppr00261  Monobactam biosynthesis
ppr00270  Cysteine and methionine metabolism
ppr00280  Valine, leucine and isoleucine degradation
ppr00290  Valine, leucine and isoleucine biosynthesis
ppr00300  Lysine biosynthesis
ppr00310  Lysine degradation
ppr00330  Arginine and proline metabolism
ppr00332  Carbapenem biosynthesis
ppr00340  Histidine metabolism
ppr00350  Tyrosine metabolism
ppr00360  Phenylalanine metabolism
ppr00362  Benzoate degradation
ppr00380  Tryptophan metabolism
ppr00400  Phenylalanine, tyrosine and tryptophan biosynthesis
ppr00401  Novobiocin biosynthesis
ppr00410  beta-Alanine metabolism
ppr00430  Taurine and hypotaurine metabolism
ppr00450  Selenocompound metabolism
ppr00460  Cyanoamino acid metabolism
ppr00470  D-Amino acid metabolism
ppr00480  Glutathione metabolism
ppr00500  Starch and sucrose metabolism
ppr00511  Other glycan degradation
ppr00520  Amino sugar and nucleotide sugar metabolism
ppr00521  Streptomycin biosynthesis
ppr00540  Lipopolysaccharide biosynthesis
ppr00541  O-Antigen nucleotide sugar biosynthesis
ppr00542  O-Antigen repeat unit biosynthesis
ppr00543  Exopolysaccharide biosynthesis
ppr00550  Peptidoglycan biosynthesis
ppr00552  Teichoic acid biosynthesis
ppr00561  Glycerolipid metabolism
ppr00562  Inositol phosphate metabolism
ppr00564  Glycerophospholipid metabolism
ppr00565  Ether lipid metabolism
ppr00592  alpha-Linolenic acid metabolism
ppr00600  Sphingolipid metabolism
ppr00620  Pyruvate metabolism
ppr00625  Chloroalkane and chloroalkene degradation
ppr00626  Naphthalene degradation
ppr00627  Aminobenzoate degradation
ppr00630  Glyoxylate and dicarboxylate metabolism
ppr00633  Nitrotoluene degradation
ppr00640  Propanoate metabolism
ppr00643  Styrene degradation
ppr00650  Butanoate metabolism
ppr00660  C5-Branched dibasic acid metabolism
ppr00670  One carbon pool by folate
ppr00680  Methane metabolism
ppr00730  Thiamine metabolism
ppr00740  Riboflavin metabolism
ppr00750  Vitamin B6 metabolism
ppr00760  Nicotinate and nicotinamide metabolism
ppr00770  Pantothenate and CoA biosynthesis
ppr00780  Biotin metabolism
ppr00785  Lipoic acid metabolism
ppr00790  Folate biosynthesis
ppr00860  Porphyrin metabolism
ppr00900  Terpenoid backbone biosynthesis
ppr00903  Limonene degradation
ppr00907  Pinene, camphor and geraniol degradation
ppr00910  Nitrogen metabolism
ppr00920  Sulfur metabolism
ppr00930  Caprolactam degradation
ppr00946  Degradation of flavonoids
ppr00999  Biosynthesis of various plant secondary metabolites
ppr01040  Biosynthesis of unsaturated fatty acids
ppr01053  Biosynthesis of siderophore group nonribosomal peptides
KO pathway
ko01100   

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Genome (1)   
   KEGG GENOME (1)   
Gene (878)   
   KEGG GENES (878)   
All databases (879)   

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