KEGG   PATHWAY: rop00970
Entry
rop00970                    Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Rhodococcus opacus B4
Class
Genetic Information Processing; Translation
Pathway map
rop00970  Aminoacyl-tRNA biosynthesis
rop00970

Organism
Rhodococcus opacus B4 [GN:rop]
Gene
ROP_t0410  tRNA-Ala [KO:K14218]
ROP_t0220  tRNA-Ala [KO:K14218]
ROP_t0370  tRNA-Ala [KO:K14218]
ROP_t0260  tRNA-Arg [KO:K14219]
ROP_t0090  tRNA-Arg [KO:K14219]
ROP_t0190  tRNA-Arg [KO:K14219]
ROP_t0130  tRNA-Arg [KO:K14219]
ROP_t0060  tRNA-Asn [KO:K14220]
ROP_t0340  tRNA-Asp [KO:K14221]
ROP_t0470  tRNA-Cys [KO:K14222]
ROP_t0140  tRNA-Cys [KO:K14222]
ROP_t0380  tRNA-Gln [KO:K14223]
ROP_t0420  tRNA-Gln [KO:K14223]
ROP_t0330  tRNA-Glu [KO:K14224]
ROP_t0430  tRNA-Glu [KO:K14224]
ROP_t0080  tRNA-Gly [KO:K14225]
ROP_t0450  tRNA-Gly [KO:K14225]
ROP_t0480  tRNA-Gly [KO:K14225]
ROP_t0360  tRNA-Gly [KO:K14225]
ROP_t0100  tRNA-His [KO:K14226]
ROP_t0210  tRNA-Ile [KO:K14227]
ROP_t0120  tRNA-Leu [KO:K14228]
ROP_t0230  tRNA-Leu [KO:K14228]
ROP_t0010  tRNA-Leu [KO:K14228]
ROP_t0390  tRNA-Leu [KO:K14228]
ROP_t0030  tRNA-Leu [KO:K14228]
ROP_t0110  tRNA-Lys [KO:K14229]
ROP_t0320  tRNA-Lys [KO:K14229]
ROP_t0050  tRNA-Met [KO:K14230]
ROP_t0160  tRNA-Met [KO:K14230]
ROP_t0200  tRNA-Met [KO:K14230]
ROP_t0400  tRNA-Met [KO:K14230]
ROP_t0350  tRNA-Phe [KO:K14231]
ROP_t0290  tRNA-Pro [KO:K14232]
ROP_t0070  tRNA-Pro [KO:K14232]
ROP_t0020  tRNA-Pro [KO:K14232]
ROP_t0250  tRNA-Ser [KO:K14233]
ROP_t0280  tRNA-Ser [KO:K14233]
ROP_t0270  tRNA-Ser [KO:K14233]
ROP_t0240  tRNA-Ser [KO:K14233]
ROP_t0170  tRNA-Thr [KO:K14234]
ROP_t0310  tRNA-Thr [KO:K14234]
ROP_t0300  tRNA-Thr [KO:K14234]
ROP_t0150  tRNA-Trp [KO:K14235]
ROP_t0180  tRNA-Tyr [KO:K14236]
ROP_t0490  tRNA-Val [KO:K14237]
ROP_t0040  tRNA-Val [KO:K14237]
ROP_t0440  tRNA-Val [KO:K14237]
ROP_t0460  tRNA-Val [KO:K14237]
ROP_41070  gluQ; glutamyl-Q-tRNA(Asp) synthetase [KO:K01885] [EC:6.1.1.17]
ROP_65460  gltX; glutamyl-tRNA synthetase [KO:K01885] [EC:6.1.1.17]
ROP_41300  putative amidase [KO:K02433] [EC:6.3.5.6 6.3.5.7]
ROP_44880  putative amidase [KO:K02433] [EC:6.3.5.6 6.3.5.7]
ROP_65270  gatA; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [KO:K02433] [EC:6.3.5.6 6.3.5.7]
ROP_71190  hypothetical protein [KO:K02433] [EC:6.3.5.6 6.3.5.7]
ROP_65330  gatB; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [KO:K02434] [EC:6.3.5.6 6.3.5.7]
ROP_65260  gatC; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [KO:K02435] [EC:6.3.5.6 6.3.5.7]
ROP_69160  alaS; alanyl-tRNA synthetase [KO:K01872] [EC:6.1.1.7]
ROP_69100  aspS; aspartyl-tRNA synthetase [KO:K01876] [EC:6.1.1.12]
ROP_35810  aspartyl-tRNA synthetase [KO:K09759] [EC:6.1.1.23]
ROP_09410  glyQS; glycyl-tRNA synthetase [KO:K01880] [EC:6.1.1.14]
ROP_68570  thrS; threonyl-tRNA synthetase [KO:K01868] [EC:6.1.1.3]
ROP_39200  serS; seryl-tRNA synthetase [KO:K01875] [EC:6.1.1.11]
ROP_43800  cysS; cysteinyl-tRNA synthetase [KO:K01883] [EC:6.1.1.16]
ROP_57250  metG; methionyl-tRNA synthetase [KO:K01874] [EC:6.1.1.10]
ROP_48100  putative formyltransferase [KO:K00604] [EC:2.1.2.9]
ROP_69440  fmt; methionyl-tRNA formyltransferase [KO:K00604] [EC:2.1.2.9]
ROP_10400  valS; valyl-tRNA synthetase [KO:K01873] [EC:6.1.1.9]
ROP_34430  leuS; leucyl-tRNA synthetase [KO:K01869] [EC:6.1.1.4]
ROP_08060  ileS; isoleucyl-tRNA synthetase [KO:K01870] [EC:6.1.1.5]
ROP_35510  putative lysyl-tRNA synthetase [KO:K04567] [EC:6.1.1.6]
ROP_43360  lysS; lysyl-tRNA synthetase [KO:K04567] [EC:6.1.1.6]
ROP_12000  argS; arginyl-tRNA synthetase [KO:K01887] [EC:6.1.1.19]
ROP_66640  proS; prolyl-tRNA synthetase [KO:K01881] [EC:6.1.1.15]
ROP_68830  hisS; histidyl-tRNA synthetase [KO:K01892] [EC:6.1.1.21]
ROP_06900  pheS; phenylalanyl-tRNA synthetase alpha chain [KO:K01889] [EC:6.1.1.20]
ROP_06890  pheT; phenylalanyl-tRNA synthetase beta chain [KO:K01890] [EC:6.1.1.20]
ROP_06730  tyrS; tyrosyl-tRNA synthetase [KO:K01866] [EC:6.1.1.1]
ROP_63000  trpS; tryptophanyl-tRNA synthetase [KO:K01867] [EC:6.1.1.2]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
rop00250  Alanine, aspartate and glutamate metabolism
rop00260  Glycine, serine and threonine metabolism
rop00270  Cysteine and methionine metabolism
rop00290  Valine, leucine and isoleucine biosynthesis
rop00300  Lysine biosynthesis
rop00330  Arginine and proline metabolism
rop00340  Histidine metabolism
rop00380  Tryptophan metabolism
rop00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (79)   
   KEGG GENES (79)   
All databases (80)   

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