KEGG   PATHWAY: sfe01100
Entry
sfe01100                    Pathway                                
Name
Metabolic pathways - Shigella flexneri 2002017 (serotype Fxv)
Class
Pathway map
sfe01100  Metabolic pathways
sfe01100

Module
sfe_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:sfe01100]
sfe_M00002  Glycolysis, core module involving three-carbon compounds [PATH:sfe01100]
sfe_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:sfe01100]
sfe_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:sfe01100]
sfe_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:sfe01100]
sfe_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:sfe01100]
sfe_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:sfe01100]
sfe_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:sfe01100]
sfe_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:sfe01100]
sfe_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:sfe01100]
sfe_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:sfe01100]
sfe_M00012  Glyoxylate cycle [PATH:sfe01100]
sfe_M00015  Proline biosynthesis, glutamate => proline [PATH:sfe01100]
sfe_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:sfe01100]
sfe_M00017  Methionine biosynthesis, aspartate => homoserine => methionine [PATH:sfe01100]
sfe_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:sfe01100]
sfe_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:sfe01100]
sfe_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:sfe01100]
sfe_M00021  Cysteine biosynthesis, serine => cysteine [PATH:sfe01100]
sfe_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:sfe01100]
sfe_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:sfe01100]
sfe_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:sfe01100]
sfe_M00025  Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:sfe01100]
sfe_M00026  Histidine biosynthesis, PRPP => histidine [PATH:sfe01100]
sfe_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:sfe01100]
sfe_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:sfe01100]
sfe_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:sfe01100]
sfe_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:sfe01100]
sfe_M00051  De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:sfe01100]
sfe_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:sfe01100]
sfe_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:sfe01100]
sfe_M00060  KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:sfe01100]
sfe_M00061  D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:sfe01100]
sfe_M00063  CMP-KDO biosynthesis [PATH:sfe01100]
sfe_M00064  ADP-L-glycero-D-manno-heptose biosynthesis [PATH:sfe01100]
sfe_M00082  Fatty acid biosynthesis, initiation [PATH:sfe01100]
sfe_M00083  Fatty acid biosynthesis, elongation [PATH:sfe01100]
sfe_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:sfe01100]
sfe_M00087  beta-Oxidation [PATH:sfe01100]
sfe_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:sfe01100]
sfe_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:sfe01100]
sfe_M00116  Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:sfe01100]
sfe_M00117  Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:sfe01100]
sfe_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:sfe01100]
sfe_M00119  Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:sfe01100]
sfe_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:sfe01100]
sfe_M00124  Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:sfe01100]
sfe_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:sfe01100]
sfe_M00133  Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine [PATH:sfe01100]
sfe_M00136  GABA biosynthesis, prokaryotes, putrescine => GABA [PATH:sfe01100]
sfe_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:sfe01100]
sfe_M00149  Succinate dehydrogenase, prokaryotes [PATH:sfe01100]
sfe_M00150  Fumarate reductase, prokaryotes [PATH:sfe01100]
sfe_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:sfe01100]
sfe_M00168  CAM (Crassulacean acid metabolism), dark [PATH:sfe01100]
sfe_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:sfe01100]
sfe_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:sfe01100]
sfe_M00364  C10-C20 isoprenoid biosynthesis, bacteria [PATH:sfe01100]
sfe_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:sfe01100]
sfe_M00530  Dissimilatory nitrate reduction, nitrate => ammonia [PATH:sfe01100]
sfe_M00533  Homoprotocatechuate degradation, homoprotocatechuate => 2-oxohept-3-enedioate [PATH:sfe01100]
sfe_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:sfe01100]
sfe_M00550  Ascorbate degradation, ascorbate => D-xylulose-5P [PATH:sfe01100]
sfe_M00554  Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:sfe01100]
sfe_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:sfe01100]
sfe_M00572  Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:sfe01100]
sfe_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:sfe01100]
sfe_M00621  Glycine cleavage system [PATH:sfe01100]
sfe_M00631  D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:sfe01100]
sfe_M00632  Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:sfe01100]
sfe_M00761  Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:sfe01100]
sfe_M00793  dTDP-L-rhamnose biosynthesis [PATH:sfe01100]
sfe_M00844  Arginine biosynthesis, ornithine => arginine [PATH:sfe01100]
sfe_M00846  Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:sfe01100]
sfe_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:sfe01100]
sfe_M00855  Glycogen degradation, glycogen => glucose-6P [PATH:sfe01100]
sfe_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:sfe01100]
sfe_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:sfe01100]
sfe_M00899  Thiamine salvage pathway, HMP/HET => TMP [PATH:sfe01100]
sfe_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:sfe01100]
sfe_M00918  Aerobactin biosynthesis, lysine => aerobactin [PATH:sfe01100]
sfe_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:sfe01100]
sfe_M00939  Pyrimidine degradation, uracil => 3-hydroxypropanoate [PATH:sfe01100]
Organism
Shigella flexneri 2002017 (serotype Fxv) [GN:sfe]
Related
pathway
sfe00010  Glycolysis / Gluconeogenesis
sfe00020  Citrate cycle (TCA cycle)
sfe00030  Pentose phosphate pathway
sfe00040  Pentose and glucuronate interconversions
sfe00051  Fructose and mannose metabolism
sfe00052  Galactose metabolism
sfe00053  Ascorbate and aldarate metabolism
sfe00061  Fatty acid biosynthesis
sfe00071  Fatty acid degradation
sfe00130  Ubiquinone and other terpenoid-quinone biosynthesis
sfe00190  Oxidative phosphorylation
sfe00220  Arginine biosynthesis
sfe00230  Purine metabolism
sfe00240  Pyrimidine metabolism
sfe00250  Alanine, aspartate and glutamate metabolism
sfe00260  Glycine, serine and threonine metabolism
sfe00261  Monobactam biosynthesis
sfe00270  Cysteine and methionine metabolism
sfe00280  Valine, leucine and isoleucine degradation
sfe00290  Valine, leucine and isoleucine biosynthesis
sfe00300  Lysine biosynthesis
sfe00310  Lysine degradation
sfe00330  Arginine and proline metabolism
sfe00332  Carbapenem biosynthesis
sfe00340  Histidine metabolism
sfe00350  Tyrosine metabolism
sfe00360  Phenylalanine metabolism
sfe00361  Chlorocyclohexane and chlorobenzene degradation
sfe00362  Benzoate degradation
sfe00364  Fluorobenzoate degradation
sfe00380  Tryptophan metabolism
sfe00400  Phenylalanine, tyrosine and tryptophan biosynthesis
sfe00401  Novobiocin biosynthesis
sfe00410  beta-Alanine metabolism
sfe00430  Taurine and hypotaurine metabolism
sfe00450  Selenocompound metabolism
sfe00460  Cyanoamino acid metabolism
sfe00470  D-Amino acid metabolism
sfe00480  Glutathione metabolism
sfe00500  Starch and sucrose metabolism
sfe00511  Other glycan degradation
sfe00520  Amino sugar and nucleotide sugar metabolism
sfe00521  Streptomycin biosynthesis
sfe00523  Polyketide sugar unit biosynthesis
sfe00525  Acarbose and validamycin biosynthesis
sfe00540  Lipopolysaccharide biosynthesis
sfe00541  O-Antigen nucleotide sugar biosynthesis
sfe00542  O-Antigen repeat unit biosynthesis
sfe00543  Exopolysaccharide biosynthesis
sfe00550  Peptidoglycan biosynthesis
sfe00552  Teichoic acid biosynthesis
sfe00561  Glycerolipid metabolism
sfe00562  Inositol phosphate metabolism
sfe00564  Glycerophospholipid metabolism
sfe00565  Ether lipid metabolism
sfe00592  alpha-Linolenic acid metabolism
sfe00600  Sphingolipid metabolism
sfe00620  Pyruvate metabolism
sfe00623  Toluene degradation
sfe00625  Chloroalkane and chloroalkene degradation
sfe00626  Naphthalene degradation
sfe00627  Aminobenzoate degradation
sfe00630  Glyoxylate and dicarboxylate metabolism
sfe00633  Nitrotoluene degradation
sfe00640  Propanoate metabolism
sfe00650  Butanoate metabolism
sfe00660  C5-Branched dibasic acid metabolism
sfe00670  One carbon pool by folate
sfe00680  Methane metabolism
sfe00730  Thiamine metabolism
sfe00740  Riboflavin metabolism
sfe00750  Vitamin B6 metabolism
sfe00760  Nicotinate and nicotinamide metabolism
sfe00770  Pantothenate and CoA biosynthesis
sfe00780  Biotin metabolism
sfe00785  Lipoic acid metabolism
sfe00790  Folate biosynthesis
sfe00860  Porphyrin metabolism
sfe00900  Terpenoid backbone biosynthesis
sfe00907  Pinene, camphor and geraniol degradation
sfe00910  Nitrogen metabolism
sfe00920  Sulfur metabolism
sfe00930  Caprolactam degradation
sfe00946  Degradation of flavonoids
sfe00997  Biosynthesis of various other secondary metabolites
sfe00999  Biosynthesis of various plant secondary metabolites
sfe01040  Biosynthesis of unsaturated fatty acids
sfe01053  Biosynthesis of siderophore group nonribosomal peptides
KO pathway
ko01100   

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Genome (1)   
   KEGG GENOME (1)   
Gene (810)   
   KEGG GENES (810)   
All databases (811)   

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