KEGG   PATHWAY: shm00010
Entry
shm00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Shewanella sp. MR-7
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
shm00010  Glycolysis / Gluconeogenesis
shm00010

Module
shm_M00002  Glycolysis, core module involving three-carbon compounds [PATH:shm00010]
shm_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:shm00010]
shm_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:shm00010]
Other DBs
GO: 0006096 0006094
Organism
Shewanella sp. MR-7 [GN:shm]
Gene
Shewmr7_3050  glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
Shewmr7_3373  D-fructose 1,6-bisphosphatase [KO:K03841] [EC:3.1.3.11]
Shewmr7_3247  fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
Shewmr7_1087  triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
Shewmr7_1952  glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
Shewmr7_1954  glyceraldehyde-3-phosphate dehydrogenase, type I [KO:K00134] [EC:1.2.1.12]
Shewmr7_3248  phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
Shewmr7_0043  phosphoglycerate mutase [KO:K15633] [EC:5.4.2.12]
Shewmr7_1186  enolase [KO:K01689] [EC:4.2.1.11]
Shewmr7_1927  pyruvate kinase [KO:K00873] [EC:2.7.1.40]
Shewmr7_3599  2-oxo-acid dehydrogenase E1 subunit, homodimeric type [KO:K00163] [EC:1.2.4.1]
Shewmr7_3598  pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase [KO:K00627] [EC:2.3.1.12]
Shewmr7_3597  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
Shewmr7_2191  Alcohol dehydrogenase, zinc-binding domain protein [KO:K00121] [EC:1.1.1.284 1.1.1.1]
Shewmr7_1758  iron-containing alcohol dehydrogenase [KO:K04072] [EC:1.2.1.10 1.1.1.1]
Shewmr7_2840  iron-containing alcohol dehydrogenase [KO:K13954] [EC:1.1.1.1]
Shewmr7_3772  Aldehyde dehydrogenase (NAD(+)) [KO:K00138] [EC:1.2.1.-]
Shewmr7_2434  acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
Shewmr7_0543  Aldose 1-epimerase [KO:K01785] [EC:5.1.3.3]
Shewmr7_1989  Aldose 1-epimerase [KO:K01785] [EC:5.1.3.3]
Shewmr7_1944  phosphoglucomutase, alpha-D-glucose phosphate-specific [KO:K01835] [EC:5.4.2.2]
Shewmr7_2460  Aldose 1-epimerase [KO:K01792] [EC:5.1.3.15]
Shewmr7_0147  phosphoenolpyruvate carboxykinase (ATP) [KO:K01610] [EC:4.1.1.49]
Shewmr7_1841  PTS system, glucose subfamily, IIA subunit [KO:K02777] [EC:2.7.1.-]
Shewmr7_2715  PTS system, glucose-like IIB subunint [KO:K02779] [EC:2.7.1.199]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
shm00020  Citrate cycle (TCA cycle)
shm00030  Pentose phosphate pathway
shm00500  Starch and sucrose metabolism
shm00620  Pyruvate metabolism
shm00640  Propanoate metabolism
KO pathway
ko00010   

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