KEGG   PATHWAY: sme00040
Entry
sme00040                    Pathway                                
Name
Pentose and glucuronate interconversions - Sinorhizobium meliloti 1021
Class
Metabolism; Carbohydrate metabolism
Pathway map
sme00040  Pentose and glucuronate interconversions
sme00040

Module
sme_M00061  D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:sme00040]
Organism
Sinorhizobium meliloti 1021 [GN:sme]
Gene
SM_b21239  putative pectate lysase, possibly truncated due to chromosomal point mutation or sequencing artefact protein [KO:K01728] [EC:4.2.2.2]
SM_b21347  putative pectin degradation protein [KO:K26933] [EC:4.2.99.25]
SMa0214  kduI; putative KduI DKI isomerase [KO:K01815] [EC:5.3.1.17]
SM_b21349  putative 4-deoxy-L-threo-5-hexulose-uronate ketol-isomerase protein [KO:K01815] [EC:5.3.1.17]
SM_b21348  putative 2-deoxy-D-gluconate 3-dehydrogenase protein [KO:K00065] [EC:1.1.1.127]
SM_b21354  uxaC; putative glucuronate isomerase (uronic isomerase) protein [KO:K01812] [EC:5.3.1.12]
SM_b20446  uxuA; D-mannonate dehydratase [KO:K01686] [EC:4.2.1.8]
SM_b20749  uxuB; probable mannitol dehydrogenase [KO:K00040] [EC:1.1.1.57]
SMc02641  rkpK; UDP-glucose 6-dehydrogenase [KO:K00012] [EC:1.1.1.22]
SM_b20960  exoN; UDPglucose pyrophosphorylase protein [KO:K00963] [EC:2.7.7.9]
SMc04023  exoN2; Probable UTP--glucose-1-phosphate uridylyltransferase [KO:K00963] [EC:2.7.7.9]
SM_b20497  lyx; putative L-xylulose kinase protein [KO:K00880] [EC:2.7.1.53]
SM_b20195  ppe; ribulose-phosphate 3-epimerase [KO:K01783] [EC:5.1.3.1]
SMc00511  rpe; Probable D-ribulose-5-phosphate 3-epimerase [KO:K01783] [EC:5.1.3.1]
SM_b21420  putative L-arabinose isomerase protein [KO:K01804] [EC:5.3.1.4]
SMc03164  xylB; Putative xylulose kinase [KO:K00854] [EC:2.7.1.17]
SMc02334  Putative carbohydrate kinase [KO:K00854] [EC:2.7.1.17]
SMc02335  Putative carbohydrate kinase [KO:K00854] [EC:2.7.1.17]
SMc02341  Carbohydrate kinase [KO:K00854] [EC:2.7.1.17]
SMc03163  xylA; Probable xylose isomerase [KO:K01805] [EC:5.3.1.5]
SMc02321  rhaI; Putative sugar isomerase [KO:K01820] [EC:5.3.1.14 5.3.1.-]
SMc01992  D-xylulose reductase [KO:K05351] [EC:1.1.1.9]
SM_b20853  galactitol 1-phosphate 5-dehydrogenase [KO:K00008] [EC:1.1.1.14]
SMa0235  dihydroxy-acid dehydratase [KO:K22186] [EC:4.2.1.82]
SM_b20262  aldehyde dehydrogenase (NADP+) [KO:K13877] [EC:1.2.1.26]
SM_b20891  araE; 2-oxoglutarate semialdehyde dehydrogenase [KO:K22187] [EC:1.2.1.-]
SMc01503  Carbohydrate kinase [KO:K00875] [EC:2.7.1.47]
SMc01618  Sugar kinase [KO:K22935] [EC:2.7.1.47]
SM_b20490  fucA2; L-fuculose-phosphate aldolase [KO:K01628] [EC:4.1.2.17]
SMc01621  fucA1; Putative L-fuculose phosphate aldolase [KO:K01628] [EC:4.1.2.17]
Compound
C00022  Pyruvate
C00026  2-Oxoglutarate
C00029  UDP-glucose
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00116  Glycerol
C00167  UDP-glucuronate
C00181  D-Xylose
C00191  D-Glucuronate
C00199  D-Ribulose 5-phosphate
C00204  2-Dehydro-3-deoxy-D-gluconate
C00216  D-Arabinose
C00231  D-Xylulose 5-phosphate
C00259  L-Arabinose
C00266  Glycolaldehyde
C00309  D-Ribulose
C00310  D-Xylulose
C00312  L-Xylulose
C00333  D-Galacturonate
C00379  Xylitol
C00433  2,5-Dioxopentanoate
C00470  Pectate
C00474  Ribitol
C00476  D-Lyxose
C00502  D-Xylonate
C00508  L-Ribulose
C00514  D-Mannonate
C00532  L-Arabitol
C00558  D-Tagaturonate
C00618  3-Dehydro-L-gulonate
C00714  Pectin
C00789  CDP-ribitol
C00800  L-Gulonate
C00817  D-Altronate
C00905  D-Fructuronate
C01068  D-Ribitol 5-phosphate
C01101  L-Ribulose 5-phosphate
C01508  L-Lyxose
C01904  D-Arabitol
C02266  D-Xylonolactone
C02273  Digalacturonate
C02426  L-Glyceraldehyde
C02753  D-Xylono-1,4-lactone
C03033  beta-D-Glucuronoside
C03291  L-Xylulose 5-phosphate
C03826  2-Dehydro-3-deoxy-D-xylonate
C04053  5-Dehydro-4-deoxy-D-glucuronate
C04349  (4S)-4,6-Dihydroxy-2,5-dioxohexanoate
C04575  (4R,5S)-4,5,6-Trihydroxy-2,3-dioxohexanoate
C05385  D-Glucuronate 1-phosphate
C05411  L-Xylonate
C05412  L-Lyxonate
C06118  4-(4-Deoxy-alpha-D-gluc-4-enuronosyl)-D-galacturonate
C06441  L-Xylulose 1-phosphate
C14899  3-Dehydro-L-gulonate 6-phosphate
C15930  L-Galactonate
C20680  2-Dehydro-3-deoxy-L-galactonate
C22337  D-Ribulose 1-phosphate
C22712  4-Deoxy-L-threo-hex-4-enopyranuronate
Reference
PMID:11741871
  Authors
Yew WS, Gerlt JA.
  Title
Utilization of L-ascorbate by Escherichia coli K-12: assignments of functions to products of the yjf-sga and yia-sgb operons.
  Journal
J Bacteriol 184:302-6 (2002)
DOI:10.1128/JB.184.1.302-306.2002
Reference
PMID:15697206
  Authors
Yew WS, Akana J, Wise EL, Rayment I, Gerlt JA
  Title
Evolution of enzymatic activities in the orotidine 5'-monophosphate decarboxylase suprafamily: enhancing the promiscuous D-arabino-hex-3-ulose 6-phosphate synthase reaction catalyzed by 3-keto-L-gulonate 6-phosphate decarboxylase.
  Journal
Biochemistry 44:1807-15 (2005)
DOI:10.1021/bi047815v
Reference
PMID:10572115
  Authors
Yasueda H, Kawahara Y, Sugimoto S.
  Title
Bacillus subtilis yckG and yckF encode two key enzymes of the ribulose monophosphate pathway used by methylotrophs, and yckH is required for their expression.
  Journal
J Bacteriol 181:7154-60 (1999)
DOI:10.1128/JB.181.23.7154-7160.1999
Reference
PMID:10913097
  Authors
Ibanez E, Gimenez R, Pedraza T, Baldoma L, Aguilar J, Badia J
  Title
Role of the yiaR and yiaS genes of Escherichia coli in metabolism of endogenously formed L-xylulose.
  Journal
J Bacteriol 182:4625-7 (2000)
DOI:10.1128/JB.182.16.4625-4627.2000
Reference
PMID:15901685
  Authors
Orita I, Yurimoto H, Hirai R, Kawarabayasi Y, Sakai Y, Kato N
  Title
The archaeon Pyrococcus horikoshii possesses a bifunctional enzyme for formaldehyde fixation via the ribulose monophosphate pathway.
  Journal
J Bacteriol 187:3636-42 (2005)
DOI:10.1128/JB.187.11.3636-3642.2005
Related
pathway
sme00010  Glycolysis / Gluconeogenesis
sme00020  Citrate cycle (TCA cycle)
sme00030  Pentose phosphate pathway
sme00052  Galactose metabolism
sme00053  Ascorbate and aldarate metabolism
sme00500  Starch and sucrose metabolism
sme00520  Amino sugar and nucleotide sugar metabolism
sme00561  Glycerolipid metabolism
sme00562  Inositol phosphate metabolism
sme00740  Riboflavin metabolism
KO pathway
ko00040   

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (30)   
   KEGG GENES (30)   
All databases (31)   

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