PATHWAY: tml01100 Help Entry tml01100                    Pathway                                 Name Metabolic pathways - Tuber melanosporum Class BRITE hierarchy Pathway map tml01100   Metabolic pathways Module tml_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:tml01100] tml_M00002   Glycolysis, core module involving three-carbon compounds [PATH:tml01100] tml_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:tml01100] tml_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:tml01100] tml_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:tml01100] tml_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:tml01100] tml_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:tml01100] tml_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:tml01100] tml_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:tml01100] tml_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:tml01100] tml_M00012   Glyoxylate cycle [PATH:tml01100] tml_M00013   Malonate semialdehyde pathway, propanoyl-CoA => acetyl-CoA [PATH:tml01100] tml_M00015   Proline biosynthesis, glutamate => proline [PATH:tml01100] tml_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:tml01100] tml_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:tml01100] tml_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:tml01100] tml_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:tml01100] tml_M00024   Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:tml01100] tml_M00025   Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:tml01100] tml_M00026   Histidine biosynthesis, PRPP => histidine [PATH:tml01100] tml_M00027   GABA (gamma-Aminobutyrate) shunt [PATH:tml01100] tml_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:tml01100] tml_M00030   Lysine biosynthesis, AAA pathway, 2-oxoglutarate => 2-aminoadipate => lysine [PATH:tml01100] tml_M00034   Methionine salvage pathway [PATH:tml01100] tml_M00035   Methionine degradation [PATH:tml01100] tml_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:tml01100] tml_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:tml01100] tml_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:tml01100] tml_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:tml01100] tml_M00072   N-glycosylation by oligosaccharyltransferase [PATH:tml01100] tml_M00073   N-glycan precursor trimming [PATH:tml01100] tml_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:tml01100] tml_M00089   Triacylglycerol biosynthesis [PATH:tml01100] tml_M00091   Phosphatidylcholine (PC) biosynthesis, PE => PC [PATH:tml01100] tml_M00092   Phosphatidylethanolamine (PE) biosynthesis, ethanolamine => PE [PATH:tml01100] tml_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:tml01100] tml_M00094   Ceramide biosynthesis [PATH:tml01100] tml_M00098   Acylglycerol degradation [PATH:tml01100] tml_M00099   Sphingosine biosynthesis [PATH:tml01100] tml_M00102   Ergocalciferol biosynthesis, FPP => ergosterol/ergocalciferol [PATH:tml01100] tml_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:tml01100] tml_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:tml01100] tml_M00128   Ubiquinone biosynthesis, eukaryotes, 4-hydroxybenzoate + polyprenyl-PP => ubiquinol [PATH:tml01100] tml_M00134   Polyamine biosynthesis, arginine => ornithine => putrescine [PATH:tml01100] tml_M00141   C1-unit interconversion, eukaryotes [PATH:tml01100] tml_M00143   NADH dehydrogenase (ubiquinone) Fe-S protein/flavoprotein complex, mitochondria [PATH:tml01100] tml_M00148   Succinate dehydrogenase (ubiquinone) [PATH:tml01100] tml_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:tml01100] tml_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:tml01100] tml_M00338   Cysteine biosynthesis, homocysteine + serine => cysteine [PATH:tml01100] tml_M00367   C10-C20 isoprenoid biosynthesis, non-plant eukaryotes [PATH:tml01100] tml_M00415   Fatty acid elongation in endoplasmic reticulum [PATH:tml01100] tml_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:tml01100] tml_M00433   Lysine biosynthesis, 2-oxoglutarate => 2-oxoadipate [PATH:tml01100] tml_M00531   Assimilatory nitrate reduction, nitrate => ammonia [PATH:tml01100] tml_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:tml01100] tml_M00554   Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:tml01100] tml_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:tml01100] tml_M00621   Glycine cleavage system [PATH:tml01100] tml_M00632   Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:tml01100] tml_M00844   Arginine biosynthesis, ornithine => arginine [PATH:tml01100] tml_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:tml01100] tml_M00855   Glycogen degradation, glycogen => glucose-6P [PATH:tml01100] tml_M00868   Heme biosynthesis, animals and fungi, glycine => heme [PATH:tml01100] tml_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:tml01100] tml_M00882   Lipoic acid biosynthesis, eukaryotes, octanoyl-ACP => dihydrolipoyl-H [PATH:tml01100] tml_M00892   UDP-N-acetyl-D-glucosamine biosynthesis, eukaryotes, glucose => UDP-GlcNAc [PATH:tml01100] tml_M00916   Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:tml01100] Organism Tuber melanosporum [GN:tml] Related pathway tml00010   Glycolysis / Gluconeogenesis tml00020   Citrate cycle (TCA cycle) tml00030   Pentose phosphate pathway tml00040   Pentose and glucuronate interconversions tml00051   Fructose and mannose metabolism tml00052   Galactose metabolism tml00053   Ascorbate and aldarate metabolism tml00061   Fatty acid biosynthesis tml00062   Fatty acid elongation tml00071   Fatty acid degradation tml00100   Steroid biosynthesis tml00130   Ubiquinone and other terpenoid-quinone biosynthesis tml00190   Oxidative phosphorylation tml00220   Arginine biosynthesis tml00230   Purine metabolism tml00240   Pyrimidine metabolism tml00250   Alanine, aspartate and glutamate metabolism tml00260   Glycine, serine and threonine metabolism tml00261   Monobactam biosynthesis tml00270   Cysteine and methionine metabolism tml00280   Valine, leucine and isoleucine degradation tml00290   Valine, leucine and isoleucine biosynthesis tml00300   Lysine biosynthesis tml00310   Lysine degradation tml00330   Arginine and proline metabolism tml00332   Carbapenem biosynthesis tml00340   Histidine metabolism tml00350   Tyrosine metabolism tml00360   Phenylalanine metabolism tml00380   Tryptophan metabolism tml00400   Phenylalanine, tyrosine and tryptophan biosynthesis tml00410   beta-Alanine metabolism tml00430   Taurine and hypotaurine metabolism tml00440   Phosphonate and phosphinate metabolism tml00450   Selenocompound metabolism tml00460   Cyanoamino acid metabolism tml00470   D-Amino acid metabolism tml00480   Glutathione metabolism tml00500   Starch and sucrose metabolism tml00510   N-Glycan biosynthesis tml00511   Other glycan degradation tml00513   Various types of N-glycan biosynthesis tml00514   Other types of O-glycan biosynthesis tml00515   Mannose type O-glycan biosynthesis tml00520   Amino sugar and nucleotide sugar metabolism tml00531   Glycosaminoglycan degradation tml00561   Glycerolipid metabolism tml00562   Inositol phosphate metabolism tml00563   Glycosylphosphatidylinositol (GPI)-anchor biosynthesis tml00564   Glycerophospholipid metabolism tml00565   Ether lipid metabolism tml00590   Arachidonic acid metabolism tml00591   Linoleic acid metabolism tml00592   alpha-Linolenic acid metabolism tml00600   Sphingolipid metabolism tml00604   Glycosphingolipid biosynthesis - ganglio series tml00620   Pyruvate metabolism tml00630   Glyoxylate and dicarboxylate metabolism tml00640   Propanoate metabolism tml00650   Butanoate metabolism tml00660   C5-Branched dibasic acid metabolism tml00670   One carbon pool by folate tml00680   Methane metabolism tml00730   Thiamine metabolism tml00740   Riboflavin metabolism tml00750   Vitamin B6 metabolism tml00760   Nicotinate and nicotinamide metabolism tml00770   Pantothenate and CoA biosynthesis tml00780   Biotin metabolism tml00785   Lipoic acid metabolism tml00790   Folate biosynthesis tml00860   Porphyrin metabolism tml00900   Terpenoid backbone biosynthesis tml00906   Carotenoid biosynthesis tml00909   Sesquiterpenoid and triterpenoid biosynthesis tml00910   Nitrogen metabolism tml00920   Sulfur metabolism tml00999   Biosynthesis of various plant secondary metabolites tml01040   Biosynthesis of unsaturated fatty acids KO pathway ko01100

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