KEGG   PATHWAY: tpi00630Help
Entry
tpi00630                    Pathway                                

Name
Glyoxylate and dicarboxylate metabolism - Treponema primitia
Class
Metabolism; Carbohydrate metabolism
BRITE hierarchy
Pathway map
tpi00630  Glyoxylate and dicarboxylate metabolism
tpi00630

Ortholog table
Organism
Treponema primitia [GN:tpi]
Gene
TREPR_2450  citrate synthase domain protein [KO:K01647] [EC:2.3.3.1]
TREPR_3317  aconitase family protein [KO:K01681] [EC:4.2.1.3]
TREPR_1773  aconitase family protein [KO:K01681] [EC:4.2.1.3]
TREPR_1303  methylaspartate mutase, E subunit [KO:K19268] [EC:5.4.99.1]
TREPR_1301  mamA; methylaspartate mutase, S subunit [KO:K01846] [EC:5.4.99.1]
TREPR_1304  methylaspartate ammonia-lyase [KO:K04835] [EC:4.3.1.2]
TREPR_3652  HAD-superfamily hydrolase, subfamily IA, variant 1 [KO:K01091] [EC:3.1.3.18]
TREPR_0801  phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
TREPR_0336  pyrophosphatase PpaX [KO:K01091] [EC:3.1.3.18]
TREPR_3525  glutamine synthetase (Glutamate--ammonia ligase) (GS) [KO:K01915] [EC:6.3.1.2]
TREPR_3838  glycine dehydrogenase (decarboxylating) [KO:K00282] [EC:1.4.4.2]
TREPR_3837  glycine dehydrogenase (decarboxylating) [KO:K00283] [EC:1.4.4.2]
TREPR_3840  gcvT; aminomethyltransferase [KO:K00605] [EC:2.1.2.10]
TREPR_3835  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
TREPR_3839  gcvH; glycine cleavage system H protein [KO:K02437]
TREPR_1805  putative hydroxypyruvate reductase [KO:K11529] [EC:2.7.1.165]
TREPR_2991  khg/kdpg aldolase [KO:K01625] [EC:4.1.3.42 4.1.2.14]
TREPR_0588  khg/kdpg family aldolase/carbohydrate kinase, pfkb family [KO:K01625] [EC:4.1.3.42 4.1.2.14]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
Reference
PMID:10978349 (EC5.3.1.22)
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta -hydroxyacid dehydrogenases in Escherichia coli and Haemophilusinfluenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
KO pathway
ko00630   

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