KEGG   PATHWAY: yph00230Help
Entry
yph00230                    Pathway                                

Name
Purine metabolism - Yersinia pestis biovar Medievalis Harbin 35
Class
Metabolism; Nucleotide metabolism
BRITE hierarchy
Pathway map
yph00230  Purine metabolism
yph00230

Ortholog table
Module
yph_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:yph00230]
yph_M00048  Inosine monophosphate biosynthesis, PRPP + glutamine => IMP [PATH:yph00230]
yph_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:yph00230]
yph_M00050  Guanine ribonucleotide biosynthesis IMP => GDP,GTP [PATH:yph00230]
Other DBs
BSID: 605429
GO: 0042278
Organism
Yersinia pestis biovar Medievalis Harbin 35 [GN:yph]
Gene
YPC_3911  nudF; ADP-ribose pyrophosphatase [KO:K01515] [EC:3.6.1.13]
YPC_0079  nudE; ADP-ribose diphosphatase [KO:K08312] [EC:3.6.1.-]
YPC_4152  deoB; phosphopentomutase [KO:K01839] [EC:5.4.2.7]
YPC_3172  pgm; phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
YPC_2306  prsA; phosphoribosylpyrophosphate synthase [KO:K00948] [EC:2.7.6.1]
YPC_1525  purF; amidophosphoribosyltransferase [KO:K00764] [EC:2.4.2.14]
YPC_0524  purD; phosphoribosylamine-glycine ligase [KO:K01945] [EC:6.3.4.13]
YPC_1294  purN; phosphoribosylglycinamide formyltransferase 1 [KO:K11175] [EC:2.1.2.2]
YPC_2506  purT; phosphoribosylglycinamide formyltransferase 2 [KO:K08289] [EC:2.1.2.2]
YPC_3119  purL; phosphoribosylformyl-glycineamide synthetase [KO:K01952] [EC:6.3.5.3]
YPC_1295  purM; phosphoribosylaminoimidazole synthetase [KO:K01933] [EC:6.3.3.1]
YPC_3356  purK; N5-carboxyaminoimidazole ribonucleotide synthase [KO:K01589] [EC:6.3.4.18]
YPC_3355  purE; N5-carboxyaminoimidazole ribonucleotide mutase [KO:K01588] [EC:5.4.99.18]
YPC_1313  purC; phosphoribosylaminoimidazole-succinocarboxamide synthetase [KO:K01923] [EC:6.3.2.6]
YPC_1738  purB; adenylosuccinate lyase [KO:K01756] [EC:4.3.2.2]
YPC_0525  purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase [KO:K00602] [EC:3.5.4.10 2.1.2.3]
YPC_4529  putative phosphoribosyl transferase protein [KO:K00759] [EC:2.4.2.7]
YPC_3677  surE; stationary-phase survival protein [KO:K03787] [EC:3.1.3.5]
YPC_1920  haloacid dehalogenase-like hydrolase family protein [KO:K08723] [EC:3.1.3.5]
YPC_0077  yrfG; phosphoglycolate phosphatase [KO:K20881] [EC:3.1.3.5]
YPC_3377  gsk; inosine-guanosine kinase [KO:K00892] [EC:2.7.1.73]
YPC_4151  deoD; purine-nucleoside phosphorylase [KO:K03784] [EC:2.4.2.1]
YPC_3499  yaiE; conserved protein [KO:K09913] [EC:2.4.2.2 2.4.2.1]
YPC_1232  xapA; xanthosine phosphorylase [KO:K03815] [EC:2.4.2.-]
YPC_3738  hpt; hypoxanthine phosphoribosyltransferase [KO:K00760] [EC:2.4.2.8]
YPC_3058  guaB; IMP dehydrogenase [KO:K00088] [EC:1.1.1.205]
YPC_3073  ndk; multifunctional nucleoside diphosphate kinase and apyrimidinic endonuclease and 3'-phosphodiesterase [KO:K00940] [EC:2.7.4.6]
YPC_0855  yggV; dITP/XTP pyrophosphatase [KO:K02428] [EC:3.6.1.66]
YPC_3515  gpt; guanine-xanthine phosphoribosyltransferase [KO:K00769] [EC:2.4.2.22]
YPC_3056  guaA; GMP synthase [KO:K01951] [EC:6.3.5.2]
YPC_3765  guaC; GMP reductase [KO:K00364] [EC:1.7.1.7]
YPC_0200  gmk; guanylate kinase [KO:K00942] [EC:2.7.4.8]
YPC_2250  pykA; pyruvate kinase II [KO:K00873] [EC:2.7.1.40]
YPC_2025  pykF; pyruvate kinase I [KO:K00873] [EC:2.7.1.40]
YPC_3210  nrdE; ribonucleoside-diphosphate reductase 2, alpha subunit [KO:K00525] [EC:1.17.4.1]
YPC_2995  nrdA; ribonucleoside-diphosphate reductase 1 alpha chain [KO:K00525] [EC:1.17.4.1]
YPC_2996  nrdB; ribonucleoside-diphosphate reductase 1 beta chain [KO:K00526] [EC:1.17.4.1]
YPC_3211  nrdF; ribonucleotide-diphosphate reductase subunit beta [KO:K00526] [EC:1.17.4.1]
YPC_3791  nrdD; anaerobic ribonucleoside-triphosphate reductase [KO:K21636] [EC:1.1.98.6]
YPC_3709  dgt; deoxyguanosine triphosphate triphosphohydrolase [KO:K01129] [EC:3.1.5.1]
YPC_0173  rpoA; RNA polymerase, alpha subunit [KO:K03040] [EC:2.7.7.6]
YPC_0505  rpoB; RNA polymerase, beta subunit [KO:K03043] [EC:2.7.7.6]
YPC_0506  rpoC; RNA polymerase, beta prime subunit [KO:K03046] [EC:2.7.7.6]
YPC_0199  rpoZ; RNA polymerase, omega subunit [KO:K03060] [EC:2.7.7.6]
YPC_4238  polA; DNA polymerase I [KO:K02335] [EC:2.7.7.7]
YPC_1098  dnaE; DNA polymerase III, alpha chain [KO:K02337] [EC:2.7.7.7]
YPC_4831  DNA polymerase III alpha subunit [KO:K02337] [EC:2.7.7.7]
YPC_4617  dnaN; DNA polymerase III, beta subunit [KO:K02338] [EC:2.7.7.7]
YPC_3403  dnaX; Holliday junction DNA helicase RuvB [KO:K02343] [EC:2.7.7.7]
YPC_3267  holA; DNA polymerase III, delta subunit [KO:K02340] [EC:2.7.7.7]
YPC_1705  holB; DNA polymerase III, delta prime subunit [KO:K02341] [EC:2.7.7.7]
YPC_1128  dnaQ; DNA polymerase III epsilon subunit [KO:K02342] [EC:2.7.7.7]
YPC_2497  holE; DNA polymerase III, theta subunit [KO:K02345] [EC:2.7.7.7]
YPC_3779  holC; DNA polymerase III, chi subunit [KO:K02339] [EC:2.7.7.7]
YPC_4167  holD; DNA polymerase III, psi subunit [KO:K02344] [EC:2.7.7.7]
YPC_0198  spoT; GTP pyrophosphokinase [KO:K01139] [EC:3.1.7.2 2.7.6.5]
YPC_1284  ppx; exopolyphosphatase [KO:K01524] [EC:3.6.1.40 3.6.1.11]
YPC_3704  relA; GTP pyrophosphokinase [KO:K00951] [EC:2.7.6.5]
YPC_0382  cyaA; adenylate cyclase [KO:K05851] [EC:4.6.1.1]
YPC_3035  cyaB; adenylate cyclase 2 [KO:K05873] [EC:4.6.1.1]
YPC_3159  putative 3',5'-cyclic-nucleotide phosphodiesterase [KO:K01120] [EC:3.1.4.17]
YPC_0621  purA; adenylosuccinate synthetase [KO:K01939] [EC:6.3.4.4]
YPC_1910  AMP nucleosidase [KO:K01241] [EC:3.2.2.4]
YPC_1067  ygdH; conserved protein [KO:K06966] [EC:3.2.2.- 3.2.2.10]
YPC_0598  cpdB; 2':3'-cyclic-nucleotide 2'-phosphodiesterase [KO:K01119] [EC:3.1.3.6 3.1.4.16]
YPC_3398  adk; adenylate kinase [KO:K00939] [EC:2.7.4.3]
YPC_3832  pnp; polynucleotide phosphorylase/polyadenylase [KO:K00962] [EC:2.7.7.8]
YPC_3908  3',5'-cyclic-nucleotide phosphodiesterase [KO:K03651] [EC:3.1.4.53]
YPC_4002  apaH; diadenosine tetraphosphatase [KO:K01525] [EC:3.6.1.41]
YPC_3683  cysC; adenosine 5'-phosphosulfate kinase [KO:K00860] [EC:2.7.1.25]
YPC_3702  mazG; nucleoside triphosphate pyrophosphohydrolase [KO:K04765] [EC:3.6.1.9]
YPC_3684  cysN; sulfate adenylyltransferase, subunit 1 [KO:K00956] [EC:2.7.7.4]
YPC_3685  cysD; sulfate adenylyltransferase, subunit 2 [KO:K00957] [EC:2.7.7.4]
YPC_3217  hypothetical protein [KO:K16842] [EC:3.5.2.5]
YPC_3548  putative amino acid hydrolase [KO:K02083] [EC:3.5.3.9]
YPC_3549  Serine--pyruvate aminotransferase/L-alanine:glyoxylate aminotransferase [KO:K00839] [EC:2.6.1.112]
YPC_3193  ureC; urease alpha subunit [KO:K01428] [EC:3.5.1.5]
YPC_3194  ureB; urease beta subunit [KO:K01429] [EC:3.5.1.5]
YPC_3195  ureA; urease gamma subunit [KO:K01430] [EC:3.5.1.5]
YPC_3558  putative amidase [KO:K22601] [EC:2.1.3.5]
Compound
C00002  ATP
C00008  ADP
C00011  CO2
C00014  Ammonia
C00020  AMP
C00035  GDP
C00037  Glycine
C00039  DNA
C00044  GTP
C00046  RNA
C00048  Glyoxylate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00064  L-Glutamine
C00081  ITP
C00086  Urea
C00104  IDP
C00117  D-Ribose 5-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00130  IMP
C00131  dATP
C00144  GMP
C00147  Adenine
C00169  Carbamoyl phosphate
C00206  dADP
C00209  Oxalate
C00212  Adenosine
C00224  Adenylyl sulfate
C00242  Guanine
C00262  Hypoxanthine
C00286  dGTP
C00294  Inosine
C00301  ADP-ribose
C00330  Deoxyguanosine
C00360  dAMP
C00361  dGDP
C00362  dGMP
C00366  Urate
C00385  Xanthine
C00387  Guanosine
C00499  Allantoate
C00559  Deoxyadenosine
C00575  3',5'-Cyclic AMP
C00603  (S)-Ureidoglycolate
C00620  alpha-D-Ribose 1-phosphate
C00655  Xanthosine 5'-phosphate
C00700  XTP
C00802  Oxalureate
C00942  3',5'-Cyclic GMP
C01228  Guanosine 3',5'-bis(diphosphate)
C01260  P1,P4-Bis(5'-adenosyl)tetraphosphate
C01261  P1,P4-Bis(5'-guanosyl) tetraphosphate
C01344  dIDP
C01345  dITP
C01367  3'-AMP
C01444  Oxamate
C01762  Xanthosine
C02091  (S)-Ureidoglycine
C02348  (R)(-)-Allantoin
C02350  (S)-Allantoin
C02353  2',3'-Cyclic AMP
C02718  N-Formiminoglycine
C03090  5-Phosphoribosylamine
C03373  Aminoimidazole ribotide
C03483  Adenosine tetraphosphate
C03614  Inosine 5'-tetraphosphate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03838  5'-Phosphoribosylglycinamide
C04051  5-Amino-4-imidazolecarboxyamide
C04376  5'-Phosphoribosyl-N-formylglycinamide
C04392  P1,P4-Bis(5'-xanthosyl) tetraphosphate
C04494  Guanosine 3'-diphosphate 5'-triphosphate
C04640  2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine
C04677  1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
C04734  1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide
C04751  1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate
C04823  1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
C05239  5-Aminoimidazole
C05512  Deoxyinosine
C05513  Urate-3-ribonucleoside
C05515  5-Ureido-4-imidazole carboxylate
C05516  5-Amino-4-imidazole carboxylate
C05993  Acetyl adenylate
C06193  Guanosine 3'-phosphate
C06194  2',3'-Cyclic GMP
C06195  Imidazolone
C06196  2'-Deoxyinosine 5'-phosphate
C06197  P1,P3-Bis(5'-adenosyl) triphosphate
C06433  5'-Benzoylphosphoadenosine
C06435  5'-Butyrylphosphoinosine
C11821  5-Hydroxyisourate
C12248  5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate
C15667  5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
Reference
  Authors
Cusa E, Obradors N, Baldoma L, Badia J, Aguilar J.
  Title
Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli.
  Journal
J Bacteriol 181:7479-84 (1999)
Reference
  Authors
Xi H, Schneider BL, Reitzer L.
  Title
Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage.
  Journal
J Bacteriol 182:5332-41 (2000)
DOI:10.1128/JB.182.19.5332-5341.2000
KO pathway
ko00230   

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