KEGG   PATHWAY: bbo03050
Entry
bbo03050                    Pathway                                
Name
Proteasome - Babesia bovis
Description
The proteasome is a protein-destroying apparatus involved in many essential cellular functions, such as regulation of cell cycle, cell differentiation, signal transduction pathways, antigen processing for appropriate immune responses, stress signaling, inflammatory responses, and apoptosis. It is capable of degrading a variety of cellular proteins in a rapid and timely fashion and most substrate proteins are modified by ubiquitin before their degradation by the proteasome. The proteasome is a large protein complex consisting of a proteolytic core called the 20S particle and ancillary factors that regulate its activity in various ways. The most common form is the 26S proteasome containing one 20S core particle and two 19S regulatory particles that enable the proteasome to degrade ubiquitinated proteins by an ATP-dependent mechanism. Another form is the immunoproteasome containing two 11S regulatory particles, PA28 alpha and PA28 beta, which are induced by interferon gamma under the conditions of intensified immune response. Other regulatory particles include PA28 gamma and PA200. Although PA28 gamma also belongs to a family of activators of the 20S proteasome, it is localized within the nucleus and forms a homoheptamer. PA28 gamma has been implicated in the regulation of cell cycle progression and apoptosis. PA200 has been identified as a large nuclear protein that stimulates proteasomal hydrolysis of peptides.
Class
Genetic Information Processing; Folding, sorting and degradation
Pathway map
bbo03050  Proteasome
bbo03050

Other DBs
GO: 0000502
Organism
Babesia bovis [GN:bbo]
Gene
BBOV_II001520  26S proteasome non-ATPase regulatory subunit 3 family protein [KO:K03033]
BBOV_III011560  26S proteasome regulatory subunit family protein [KO:K03035]
BBOV_III008580  PCI domain family protein [KO:K03036]
BBOV_II001850  proteasome PCI/PINT domain family protein [KO:K03037]
BBOV_II003480  putative 26S proteasome regulatory particle non-ATPase subunit8 [KO:K03038]
BBOV_II003010  PCI/PINT 26S proteasome regulatory subunit family protein [KO:K03039]
BBOV_II007480  26S proteasome regulatory subunit family protein [KO:K03030]
BBOV_III003610  26S proteasome non-ATPase regulatory subunit Nin1/mts3 family protein [KO:K03031]
BBOV_II002950  26 proteasome complex subunit family protein [KO:K10881]
BBOV_II002240  26S proteasome regulatory subunit RPN10 domain protein [KO:K03029]
BBOV_IV009920  26S protease regulatory RPN1 unit family protein [KO:K03028]
BBOV_II001620  putative rpn2_yeast 26S proteasome regulatory subunit rpn2 [KO:K03032]
BBOV_III006190  Proteasome complex subunit Rpn13 ubiquitin receptor family protein [KO:K06691]
BBOV_IV009940  26S protease regulatory RPT1 unit family protein [KO:K03061]
BBOV_IV009290  26S protease regulatory subunit 4 like family protein [KO:K03062]
BBOV_I000480  26S proteasome family protein [KO:K03066]
BBOV_II003900  putative 26S proteasome AAA-ATPase subunit RPT4a [KO:K03064]
BBOV_IV004580  putative 26S protease regulatory subunit 6A [KO:K03065]
BBOV_II004930  putative 26s proteasome aaa-ATPase subunit Rpt3 [KO:K03063]
BBOV_II005350  Proteasome activator pa28 beta subunit family protein [KO:K06697]
BBOV_III006890  proteasome activator family protein [KO:K06699]
BBOV_II002330  putative proteasome subunit alpha type 6 protein [KO:K02730] [EC:3.4.25.1]
BBOV_III000310  putative 20S proteasome subunit alpha 2 [KO:K02726] [EC:3.4.25.1]
BBOV_III009190  20S proteasome A-type and B-type family protein [KO:K02728] [EC:3.4.25.1]
BBOV_III009200  20S proteasome A-type and B-type family protein [KO:K02731] [EC:3.4.25.1]
BBOV_I001480  putative proteasome alpha 5 subunit [KO:K02729] [EC:3.4.25.1]
BBOV_IV000320  putative Proteasome subunit alpha type-1 [KO:K02725] [EC:3.4.25.1]
BBOV_IV007800  Proteasome subunit alpha type-3 domain protein [KO:K02727] [EC:3.4.25.1]
BBOV_II005970  Proteasome subunit family protein [KO:K02738] [EC:3.4.25.1]
BBOV_IV008660  putative proteasome subunit beta 7 [KO:K02739] [EC:3.4.25.1]
BBOV_III007090  putative 20S proteasome subunit beta 3 [KO:K02735] [EC:3.4.25.1]
BBOV_I004450  putative proteasome beta 2 subunit [KO:K02734] [EC:3.4.25.1]
BBOV_IV009000  putative Proteasome subunit beta type-5 [KO:K02737] [EC:3.4.25.1]
BBOV_II002710  Proteasome subunit beta type-1 family protein [KO:K02732] [EC:3.4.25.1]
BBOV_IV002060  Proteasome subunit family protein [KO:K02736] [EC:3.4.25.1]
Reference
  Authors
Hirano Y, Murata S, Tanaka K
  Title
Large- and small-scale purification of mammalian 26S proteasomes.
  Journal
Methods Enzymol 399:227-40 (2005)
DOI:10.1016/S0076-6879(05)99015-0
Reference
  Authors
Saeki Y, Tanaka K
  Title
Cell biology: two hands for degradation.
  Journal
Nature 453:460-1 (2008)
DOI:10.1038/453460a
Reference
  Authors
Smith DM, Benaroudj N, Goldberg A
  Title
Proteasomes and their associated ATPases: a destructive combination.
  Journal
J Struct Biol 156:72-83 (2006)
DOI:10.1016/j.jsb.2006.04.012
Reference
  Authors
Strehl B, Seifert U, Kruger E, Heink S, Kuckelkorn U, Kloetzel PM
  Title
Interferon-gamma, the functional plasticity of the ubiquitin-proteasome system, and MHC class I antigen processing.
  Journal
Immunol Rev 207:19-30 (2005)
DOI:10.1111/j.0105-2896.2005.00308.x
Reference
  Authors
Darwin KH
  Title
Prokaryotic ubiquitin-like protein (Pup), proteasomes and pathogenesis.
  Journal
Nat Rev Microbiol 7:485-91 (2009)
DOI:10.1038/nrmicro2148
Reference
  Authors
Tomko RJ Jr, Hochstrasser M
  Title
Molecular architecture and assembly of the eukaryotic proteasome.
  Journal
Annu Rev Biochem 82:415-45 (2013)
DOI:10.1146/annurev-biochem-060410-150257
Reference
  Authors
Budenholzer L, Cheng CL, Li Y, Hochstrasser M
  Title
Proteasome Structure and Assembly.
  Journal
J Mol Biol 429:3500-3524 (2017)
DOI:10.1016/j.jmb.2017.05.027
Reference
  Authors
Cloos J, Roeten MS, Franke NE, van Meerloo J, Zweegman S, Kaspers GJ, Jansen G
  Title
(Immuno)proteasomes as therapeutic target in acute leukemia.
  Journal
Cancer Metastasis Rev 36:599-615 (2017)
DOI:10.1007/s10555-017-9699-4
Reference
  Authors
Sakata E, Bohn S, Mihalache O, Kiss P, Beck F, Nagy I, Nickell S, Tanaka K, Saeki Y, Forster F, Baumeister W
  Title
Localization of the proteasomal ubiquitin receptors Rpn10 and Rpn13 by electron cryomicroscopy.
  Journal
Proc Natl Acad Sci U S A 109:1479-84 (2012)
DOI:10.1073/pnas.1119394109
Related
pathway
bbo04120  Ubiquitin mediated proteolysis
KO pathway
ko03050   

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