KEGG   PATHWAY: bmy03430
Entry
bmy03430                    Pathway                                
Name
Mismatch repair - Brugia malayi (filaria)
Description
DNA mismatch repair (MMR) is a highly conserved biological pathway that plays a key role in maintaining genomic stability. MMR corrects DNA mismatches generated during DNA replication, thereby preventing mutations from becoming permanent in dividing cells. MMR also suppresses homologous recombination and was recently shown to play a role in DNA damage signaling. Defects in MMR are associated with genome-wide instability, predisposition to certain types of cancer including HNPCC, resistance to certain chemotherapeutic agents, and abnormalities in meiosis and sterility in mammalian systems.
The Escherichia coli MMR pathway has been extensively studied and is well characterized. In E. coli, the mismatch-activated MutS-MutL-ATP complex licenses MutH to incise the nearest unmethylated GATC sequence. UvrD and an exonuclease generate a gap. This gap is filled by pol III and DNA ligase. The GATC sites are then methylated by Dam. Several human MMR proteins have been identified based on their homology to E. coli MMR proteins. These include human homologs of MutS and MutL. Although E. coli MutS and MutL proteins are homodimers, human MutS and MutL homologs are heterodimers. The role of hemimethylated dGATC sites as a signal for strand discrimination is not conserved from E. coli to human. Human MMR is presumed to be nick-directed in vivo, and is thought to discriminate daughter and template strands using a strand-specific nick.
Class
Genetic Information Processing; Replication and repair
Pathway map
bmy03430  Mismatch repair
bmy03430

Other DBs
GO: 0006298
Organism
Brugia malayi (filaria) [GN:bmy]
Gene
BM_BM4638  Bma-pms-2; DNA mismatch repair protein MutL containing protein [KO:K10858]
BM_BM13925  Bma-mlh-1; DNA mismatch repair protein MutL containing protein [KO:K08734]
BM_BM6620  Bma-msh-6; MutS domain III family protein [KO:K08737]
BM_BM4680  Bma-msh-2; Uncharacterized protein [KO:K08735]
BM_BM13798  Bma-rfc-4; replication factor C, 37kDa subunit, putative [KO:K10755]
BM_BM13799  Bma-rfc-2; Activator 1 40 kDa subunit, putative [KO:K10755]
BM_BM13932  Bma-rfc-3; Activator 1 38 kDa subunit (Replication factor C 38 kDa subunit), putative [KO:K10756]
BM_BM6156  Bma-pcn-1; proliferating cell nuclear antigen (PCNA), putative [KO:K04802]
BM_BM9885  Bma-exo-1; XPG I-region family protein [KO:K10746] [EC:3.1.-.-]
BM_BM9861  Bm9861; replication factor A 73 kDa subunit, putative [KO:K07466]
BM_BM8916  Bm8916; uncharacterized protein [KO:K10739]
BM_BM13796  Bm13796; DNA polymerase delta catalytic subunit, putative [KO:K02327] [EC:2.7.7.7]
BM_BM13974  Bm13974; pold2-prov protein, putative [KO:K02328]
BM_BM394  Bm394; Uncharacterized protein [KO:K03504]
BM_BM2459  Bma-lig-1; DNA ligase, putative [KO:K10747] [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Reference
  Authors
Jiricny J.
  Title
The multifaceted mismatch-repair system.
  Journal
Nat Rev Mol Cell Biol 7:335-46 (2006)
DOI:10.1038/nrm1907
Reference
  Authors
Li GM.
  Title
Mechanisms and functions of DNA mismatch repair.
  Journal
Cell Res 18:85-98 (2008)
DOI:10.1038/cr.2007.115
Reference
  Authors
Marti TM, Kunz C, Fleck O.
  Title
DNA mismatch repair and mutation avoidance pathways.
  Journal
J Cell Physiol 191:28-41 (2002)
DOI:10.1002/jcp.10077
Reference
  Authors
Ikejima M, Shimada T.
  Title
[Molecular mechanism of mismatch repair]
  Journal
Tanpakushitsu Kakusan Koso 46:1124-9 (2001)
KO pathway
ko03430   

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