KEGG   PATHWAY: egr00970
Entry
egr00970                    Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Eucalyptus grandis (rose gum)
Class
Genetic Information Processing; Translation
Pathway map
egr00970  Aminoacyl-tRNA biosynthesis
egr00970

Organism
Eucalyptus grandis (rose gum) [GN:egr]
Gene
9829710  trnA-UGC; tRNA-Ala [KO:K14218]
9829728  trnA-UGC; tRNA-Ala [KO:K14218]
9829626  trnR-UCU; tRNA-Arg [KO:K14219]
9829727  trnR-ACG; tRNA-Arg [KO:K14219]
9829618  trnR-ACG; tRNA-Arg [KO:K14219]
9829712  trnN-GUU; tRNA-Asn [KO:K14220]
9829726  trnN-GUU; tRNA-Asn [KO:K14220]
38466597  EI154_mgt13; tRNA-Asn [KO:K14220]
9829638  trnD-GUC; tRNA-Asp [KO:K14221]
38466576  EI154_mgt06; tRNA-Asp [KO:K14221]
9829635  trnC-GCA; tRNA-Cys [KO:K14222]
38466603  EI154_mgt17; tRNA-Cys [KO:K14222]
9829621  trnQ-UUG; tRNA-Gln [KO:K14223]
9829640  trnE-UUC; tRNA-Glu [KO:K14224]
38466574  EI154_mgt04; tRNA-Glu [KO:K14224]
9829646  trnG-UCC; tRNA-Gly [KO:K14225]
38466613  EI154_mgt20; tRNA-Gly [KO:K14225]
9829738  trnH-GUG; tRNA-His [KO:K14226]
38466598  EI154_mgt14; tRNA-His [KO:K14226]
9829615  trnI-GAU; tRNA-Ile [KO:K14227]
9829729  trnI-GAU; tRNA-Ile [KO:K14227]
9829716  trnL-UAG; tRNA-Leu [KO:K14228]
9829704  trnL-CAA; tRNA-Leu [KO:K14228]
9829733  trnL-CAA; tRNA-Leu [KO:K14228]
9829655  trnL-UAA; tRNA-Leu [KO:K14228]
9829620  trnK-UUU; tRNA-Lys [KO:K14229]
38466562  EI154_mgt02; tRNA-Lys [KO:K14229]
9829647  trnfM-CAU; tRNA-fMet [KO:K14230]
9829701  trnI-CAU; tRNA-Ile [KO:K14230]
9829661  trnM-CAU; tRNA-Met [KO:K14230]
9829736  trnI-CAU; tRNA-Ile [KO:K14230]
38466558  EI154_mgt01; tRNA-Met [KO:K14230]
38466563  tRNA-fMet; tRNA-Met [KO:K14230]
38466586  tRNA-fMet; tRNA-Met [KO:K14230]
38466591  EI154_mgt12; tRNA-Met [KO:K14230]
9829656  trnF-GAA; tRNA-Phe [KO:K14231]
38466583  EI154_mgt09; tRNA-Phe [KO:K14231]
9829677  trnP-UGG; tRNA-Pro [KO:K14232]
38466584  EI154_mgt10; tRNA-Pro [KO:K14232]
9829625  trnS-GCU; tRNA-Ser [KO:K14233]
9829644  trnS-UGA; tRNA-Ser [KO:K14233]
9829652  trnS-GGA; tRNA-Ser [KO:K14233]
38466582  EI154_mgt08; tRNA-Ser [KO:K14233]
9829641  trnT-GGU; tRNA-Thr [KO:K14234]
9829654  trnT-UGU; tRNA-Thr [KO:K14234]
9829676  trnW-CCA; tRNA-Trp [KO:K14235]
38466580  EI154_mgt07; tRNA-Trp [KO:K14235]
9829639  trnY-GUA; tRNA-Tyr [KO:K14236]
38466575  EI154_mgt05; tRNA-Tyr [KO:K14236]
38466601  EI154_mgt15; tRNA-Tyr [KO:K14236]
9829707  trnV-GAC; tRNA-Val [KO:K14237]
9829660  trnV-UAC; tRNA-Val [KO:K14237]
9829730  trnV-GAC; tRNA-Val [KO:K14237]
104415925  glutamate--tRNA ligase, chloroplastic/mitochondrial [KO:K01885] [EC:6.1.1.17]
104456909  glutamate--tRNA ligase, cytoplasmic isoform X1 [KO:K01885] [EC:6.1.1.17]
120295728  glutamate--tRNA ligase, chloroplastic/mitochondrial-like [KO:K01885] [EC:6.1.1.17]
104427312  glutamyl-tRNA(Gln) amidotransferase subunit A, chloroplastic/mitochondrial [KO:K02433] [EC:6.3.5.6 6.3.5.7]
104453048  glutamyl-tRNA(Gln) amidotransferase subunit B, chloroplastic/mitochondrial [KO:K02434] [EC:6.3.5.6 6.3.5.7]
104414383  LOW QUALITY PROTEIN: glutamyl-tRNA(Gln) amidotransferase subunit B, chloroplastic/mitochondrial [KO:K02434] [EC:6.3.5.6 6.3.5.7]
104436276  glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial [KO:K02435] [EC:6.3.5.6 6.3.5.7]
104433269  glutamine--tRNA ligase, cytoplasmic [KO:K01886] [EC:6.1.1.18]
104421590  alanine--tRNA ligase isoform X1 [KO:K01872] [EC:6.1.1.7]
104419008  alanine--tRNA ligase, chloroplastic/mitochondrial isoform X1 [KO:K01872] [EC:6.1.1.7]
104438360  LOW QUALITY PROTEIN: aspartate--tRNA ligase 2, cytoplasmic [KO:K22503] [EC:6.1.1.12]
104425631  LOW QUALITY PROTEIN: aspartate--tRNA ligase 2, cytoplasmic [KO:K22503] [EC:6.1.1.12]
120286009  aspartate--tRNA ligase 2, cytoplasmic-like [KO:K22503] [EC:6.1.1.12]
104419807  aspartate--tRNA ligase, chloroplastic/mitochondrial [KO:K01876] [EC:6.1.1.12]
104436522  LOW QUALITY PROTEIN: asparagine--tRNA ligase, cytoplasmic 1 [KO:K01893] [EC:6.1.1.22]
104456493  asparagine--tRNA ligase, cytoplasmic 2 [KO:K01893] [EC:6.1.1.22]
104441916  LOW QUALITY PROTEIN: asparagine--tRNA ligase, chloroplastic/mitochondrial [KO:K01893] [EC:6.1.1.22]
104453561  glycine--tRNA ligase, mitochondrial 1 [KO:K01880] [EC:6.1.1.14]
104455646  LOW QUALITY PROTEIN: glycine--tRNA ligase, mitochondrial 1 [KO:K01880] [EC:6.1.1.14]
104415787  glycine--tRNA ligase, chloroplastic/mitochondrial 2 isoform X1 [KO:K14164] [EC:6.1.1.14]
104434863  LOW QUALITY PROTEIN: threonine--tRNA ligase, chloroplastic/mitochondrial 2 [KO:K01868] [EC:6.1.1.3]
104434853  LOW QUALITY PROTEIN: threonine--tRNA ligase, chloroplastic/mitochondrial 2-like [KO:K01868] [EC:6.1.1.3]
104433554  threonine--tRNA ligase, mitochondrial 1 [KO:K01868] [EC:6.1.1.3]
120286506  LOW QUALITY PROTEIN: threonine--tRNA ligase, chloroplastic/mitochondrial 2-like [KO:K01868] [EC:6.1.1.3]
104447986  serine--tRNA ligase, chloroplastic/mitochondrial isoform X1 [KO:K01875] [EC:6.1.1.11]
104415549  serine--tRNA ligase [KO:K01875] [EC:6.1.1.11]
104433268  cysteine--tRNA ligase 2, cytoplasmic isoform X1 [KO:K01883] [EC:6.1.1.16]
104441430  cysteine--tRNA ligase 2, cytoplasmic isoform X1 [KO:K01883] [EC:6.1.1.16]
104430835  cysteine--tRNA ligase, chloroplastic/mitochondrial isoform X1 [KO:K01883] [EC:6.1.1.16]
104456019  methionine--tRNA ligase, cytoplasmic [KO:K01874] [EC:6.1.1.10]
104420917  methionine--tRNA ligase, chloroplastic/mitochondrial [KO:K01874] [EC:6.1.1.10]
104449586  methionyl-tRNA formyltransferase isoform X1 [KO:K00604] [EC:2.1.2.9]
104449711  valine--tRNA ligase, chloroplastic/mitochondrial 2 isoform X1 [KO:K01873] [EC:6.1.1.9]
104451001  LOW QUALITY PROTEIN: valine--tRNA ligase, mitochondrial 1 [KO:K01873] [EC:6.1.1.9]
104445683  leucine--tRNA ligase, chloroplastic/mitochondrial [KO:K01869] [EC:6.1.1.4]
104457015  leucine--tRNA ligase, cytoplasmic isoform X1 [KO:K01869] [EC:6.1.1.4]
104456261  isoleucine--tRNA ligase, cytoplasmic [KO:K01870] [EC:6.1.1.5]
104415139  isoleucine--tRNA ligase, chloroplastic/mitochondrial [KO:K01870] [EC:6.1.1.5]
104435945  lysine--tRNA ligase, cytoplasmic [KO:K04567] [EC:6.1.1.6]
104422280  LOW QUALITY PROTEIN: lysine--tRNA ligase, chloroplastic/mitochondrial [KO:K04567] [EC:6.1.1.6]
104438211  arginine--tRNA ligase, cytoplasmic isoform X1 [KO:K01887] [EC:6.1.1.19]
104448437  proline--tRNA ligase, chloroplastic/mitochondrial [KO:K01881] [EC:6.1.1.15]
104421463  proline--tRNA ligase, cytoplasmic [KO:K01881] [EC:6.1.1.15]
104424617  proline--tRNA ligase, cytoplasmic isoform X1 [KO:K01881] [EC:6.1.1.15]
104443321  histidine--tRNA ligase, cytoplasmic [KO:K01892] [EC:6.1.1.21]
104449799  histidine--tRNA ligase, cytoplasmic [KO:K01892] [EC:6.1.1.21]
104426340  histidine--tRNA ligase, chloroplastic/mitochondrial [KO:K01892] [EC:6.1.1.21]
104437429  LOW QUALITY PROTEIN: phenylalanine--tRNA ligase, chloroplastic/mitochondrial [KO:K01889] [EC:6.1.1.20]
104440747  phenylalanine--tRNA ligase alpha subunit, cytoplasmic [KO:K01889] [EC:6.1.1.20]
104432343  phenylalanine--tRNA ligase beta subunit, cytoplasmic [KO:K01890] [EC:6.1.1.20]
104444916  LOW QUALITY PROTEIN: phenylalanine--tRNA ligase beta subunit, cytoplasmic [KO:K01890] [EC:6.1.1.20]
104433953  tyrosine--tRNA ligase 1, cytoplasmic isoform X1 [KO:K01866] [EC:6.1.1.1]
104419074  LOW QUALITY PROTEIN: tyrosine--tRNA ligase, chloroplastic/mitochondrial [KO:K01866] [EC:6.1.1.1]
104424861  tyrosine--tRNA ligase 1, cytoplasmic [KO:K01866] [EC:6.1.1.1]
104428686  tryptophan--tRNA ligase, cytoplasmic [KO:K01867] [EC:6.1.1.2]
104437803  tryptophan--tRNA ligase, chloroplastic/mitochondrial isoform X1 [KO:K01867] [EC:6.1.1.2]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
egr00250  Alanine, aspartate and glutamate metabolism
egr00260  Glycine, serine and threonine metabolism
egr00270  Cysteine and methionine metabolism
egr00290  Valine, leucine and isoleucine biosynthesis
egr00300  Lysine biosynthesis
egr00330  Arginine and proline metabolism
egr00340  Histidine metabolism
egr00380  Tryptophan metabolism
egr00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (109)   
   KEGG GENES (109)   
All databases (110)   

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