KEGG   PATHWAY: ehi04144
Entry
ehi04144                    Pathway                                
Name
Endocytosis - Entamoeba histolytica
Description
Endocytosis is a mechanism for cells to remove ligands, nutrients, and plasma membrane (PM) proteins, and lipids from the cell surface, bringing them into the cell interior. Transmembrane proteins entering through clathrin-dependent endocytosis (CDE) have sequences in their cytoplasmic domains that bind to the APs (adaptor-related protein complexes) and enable their rapid removal from the PM. In addition to APs and clathrin, there are numerous accessory proteins including dynamin. Depending on the various proteins that enter the endosome membrane, these cargoes are sorted to distinct destinations. Some cargoes, such as nutrient receptors, are recycled back to the PM. Ubiquitylated membrane proteins, such as activated growth-factor receptors, are sorted into intraluminal vesicles and eventually end up in the lysosome lumen via multivesicular endosomes (MVEs). There are distinct mechanisms of clathrin-independent endocytosis (CIE) depending upon the cargo and the cell type.
Class
Cellular Processes; Transport and catabolism
Pathway map
ehi04144  Endocytosis
ehi04144

Other DBs
GO: 0006897
Organism
Entamoeba histolytica [GN:ehi]
Gene
EHI_153770  13.t00009; phosphatidylinositol-4-phosphate 5-kinase [KO:K00889] [EC:2.7.1.68]
EHI_146550  350.t00005; phospholipase D [KO:K01115] [EC:3.1.4.4]
EHI_082560  145.t00004; phospholipase D [KO:K01115] [EC:3.1.4.4]
EHI_045710  287.t00007; AP-2 complex protein [KO:K11824]
EHI_124560  AP-2 complex subunit mu [KO:K11826]
EHI_135430  296.t00007; Clathrin coat assembly protein [KO:K11826]
EHI_009940  4.t00004; Clathrin adaptor complex small chain [KO:K11827]
EHI_091530  222.t00005; BAR/SH3 domain containing protein [KO:K11247]
EHI_142950  217.t00017; hypothetical protein [KO:K12562]
EHI_176980  192.t00006; hypothetical protein [KO:K12471]
EHI_072050  82.t00025; Viral A-type inclusion protein repeat [KO:K12472]
EHI_111050  1.t00001; actin-like protein [KO:K17260]
EHI_198930  890.t00001; Actin-related protein 3 [KO:K18584]
EHI_094120  349.t00003; ARP2/3 complex 41 kDa subunit [KO:K05757]
EHI_045000  3.t00092; actin-related protein 2/3 complex subunit 1A [KO:K05757]
EHI_199690  211.t00012; ARP2/3 complex 34 kda subunit [KO:K05758]
EHI_091250  45.t00014; ARP2/3 complex 34 kda subunit [KO:K05758]
EHI_172960  836.t00001; ARP2/3 complex 21 kDa subunit [KO:K05756]
EHI_174910  86.t00013; ARP2/3 complex 21 kDa subunit [KO:K05756]
EHI_152660  429.t00005; ARP2/3 complex 20 kDa subunit [KO:K05755]
EHI_030820  195.t00002; ARP2/3 complex 20 kDa subunit [KO:K05755]
EHI_103440  118.t00012; hypothetical protein [KO:K05754]
EHI_103700  hypothetical protein [KO:K05754]
EHI_052860  218.t00008; heat shock protein 70 [KO:K03283]
EHI_104330  38.t00041; heat shock protein70, hsp70A2 [KO:K03283]
EHI_002560  418.t00001; heat shock protein 70 [KO:K03283]
EHI_155490  71.t00020; heat shock protein 70 [KO:K03283]
EHI_180380  heat shock protein 70 [KO:K03283]
EHI_192510  69.t00023; hypothetical protein [KO:K03283]
EHI_198320  278.t00009; heat shock protein 70 [KO:K03283]
EHI_201260  136.t00006; heat shock protein 70 [KO:K03283]
EHI_021780  heat shock protein 70 [KO:K03283]
EHI_150770  584.t00001; heat shock protein 70 [KO:K03283]
EHI_113410  7.t00068; heat shock protein 70 [KO:K03283]
EHI_188610  heat shock protein 70 [KO:K03283]
EHI_192440  69.t00034; heat shock protein70, hsp70A2 [KO:K03283]
EHI_107030  205.t00006; hypothetical protein [KO:K18465]
EHI_045500  78.t00022; hypothetical protein [KO:K18464]
EHI_050810  10.t00024; WH2 motif domain contaning protein [KO:K18461]
EHI_033740  206.t00008; F-actin capping protein alpha subunit [KO:K10364]
EHI_140640  60.t00013; F-actin capping protein subunit alpha [KO:K10364]
EHI_005020  103.t00012; F-actin capping protein beta subunit [KO:K10365]
EHI_025270  99.t00010; vacuolar sorting protein 29 [KO:K18467]
EHI_062490  180.t00008; vacuolar sorting protein 26 [KO:K18466]
EHI_002990  98.t00005; vacuolar protein sorting 35 [KO:K18468]
EHI_004400  hypothetical protein [KO:K17918]
EHI_192810  333.t00002; small GTPase Rab7A [KO:K07897]
EHI_001870  250.t00011; Rab family GTPase [KO:K07897]
EHI_189100  319.t00001; small GTP binding protein Rab7 [KO:K07897]
EHI_189990  122.t00028; Rab family GTPase [KO:K07897]
EHI_081330  7.t00081; Rab family GTPase [KO:K07897]
EHI_082070  141.t00008; Rab family GTPase [KO:K07897]
EHI_178530  134.t00016; tumor susceptibility gene 101 protein [KO:K12183]
EHI_194210  46.t00043; hypothetical protein [KO:K12183]
EHI_131120  27.t00053; ELL complex EAP30 subunit [KO:K12188]
EHI_045320  78.t00005; vacuolar protein sorting 36 [KO:K12190]
EHI_137860  64.t00039; hypothetical protein [KO:K12189]
EHI_169820  19.t00065; SNF7 family protein [KO:K12194]
EHI_194400  46.t00026; SNF7 family protein [KO:K12191]
EHI_118900  62.t00004; vacuolar sorting protein VPS4 [KO:K12196]
EHI_010040  4.t00119; hypothetical protein [KO:K12199]
EHI_114790  227.t00007; SNF7 family protein [KO:K12198]
EHI_165220  127.t00023; hypothetical protein [KO:K12200]
EHI_167710  26.t00039; hypothetical protein [KO:K12200]
EHI_152680  24.t00022; EH-domain containing protein [KO:K12483]
EHI_160900  487.t00008; Sec1 family protein [KO:K12479]
EHI_154290  vacuolar protein sorting-associated protein 45 [KO:K12479]
EHI_003020  Rab family GTPase [KO:K07901]
EHI_008640  114.t00023; Rab family GTPase [KO:K07901]
EHI_053150  4.t00017; Rab family GTPase [KO:K07901]
EHI_127380  123.t00008; Rab family GTPase [KO:K07901]
EHI_199820  95.t00027; Rab family GTPase [KO:K07901]
EHI_122730  59.t00020; Rab family GTPase [KO:K07876]
EHI_140140  8.t00013; gtpase activating protein [KO:K12486]
EHI_138360  35.t00029; ARF GTPase activating protein [KO:K12488]
EHI_152090  2.t00128; ARF GTPase activating protein [KO:K12489]
EHI_004810  203.t00015; hypothetical protein [KO:K12492]
EHI_137720  9.t00053; ADP-ribosylation factor [KO:K07937]
EHI_073470  64.t00008; ADP-ribosylation factor [KO:K07937]
EHI_189960  122.t00024; ADP-ribosylation factor [KO:K07937]
EHI_073480  9.t00052; ADP-ribosylation factor [KO:K07937]
Compound
C00035  GDP
C00044  GTP
C04549  1-Phosphatidyl-1D-myo-inositol 3-phosphate
C04637  1-Phosphatidyl-D-myo-inositol 4,5-bisphosphate
C05981  Phosphatidylinositol-3,4,5-trisphosphate
C11556  1-Phosphatidyl-1D-myo-inositol 3,5-bisphosphate
Reference
  Authors
Acconcia F, Sigismund S, Polo S
  Title
Ubiquitin in trafficking: the network at work.
  Journal
Exp Cell Res 315:1610-8 (2009)
DOI:10.1016/j.yexcr.2008.10.014
Reference
  Authors
Donaldson JG, Porat-Shliom N, Cohen LA
  Title
Clathrin-independent endocytosis: a unique platform for cell signaling and PM remodeling.
  Journal
Cell Signal 21:1-6 (2009)
DOI:10.1016/j.cellsig.2008.06.020
Reference
  Authors
Sorkin A
  Title
Cargo recognition during clathrin-mediated endocytosis: a team effort.
  Journal
Curr Opin Cell Biol 16:392-9 (2004)
DOI:10.1016/j.ceb.2004.06.001
Reference
  Authors
Raiborg C, Stenmark H
  Title
The ESCRT machinery in endosomal sorting of ubiquitylated membrane proteins.
  Journal
Nature 458:445-52 (2009)
DOI:10.1038/nature07961
Reference
  Authors
Scita G, Di Fiore PP
  Title
The endocytic matrix.
  Journal
Nature 463:464-73 (2010)
DOI:10.1038/nature08910
Reference
  Authors
Le Roy C, Wrana JL
  Title
Clathrin- and non-clathrin-mediated endocytic regulation of cell signalling.
  Journal
Nat Rev Mol Cell Biol 6:112-26 (2005)
DOI:10.1038/nrm1571
Reference
  Authors
Jovic M, Sharma M, Rahajeng J, Caplan S
  Title
The early endosome: a busy sorting station for proteins at the crossroads.
  Journal
Histol Histopathol 25:99-112 (2010)
DOI:10.14670/HH-25.99
Reference
  Authors
Pietiainen VM, Marjomaki V, Heino J, Hyypia T
  Title
Viral entry, lipid rafts and caveosomes.
  Journal
Ann Med 37:394-403 (2005)
DOI:10.1080/07853890510011976
Reference
  Authors
Grant BD, Donaldson JG
  Title
Pathways and mechanisms of endocytic recycling.
  Journal
Nat Rev Mol Cell Biol 10:597-608 (2009)
DOI:10.1038/nrm2755
Reference
  Authors
Cullen PJ, Korswagen HC
  Title
Sorting nexins provide diversity for retromer-dependent trafficking events.
  Journal
Nat Cell Biol 14:29-37 (2012)
DOI:10.1038/ncb2374
Related
pathway
ehi04070  Phosphatidylinositol signaling system
ehi04130  SNARE interactions in vesicular transport
KO pathway
ko04144   

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