KEGG   PATHWAY: gla03430
Entry
gla03430                    Pathway                                
Name
Mismatch repair - Giardia lamblia
Description
DNA mismatch repair (MMR) is a highly conserved biological pathway that plays a key role in maintaining genomic stability. MMR corrects DNA mismatches generated during DNA replication, thereby preventing mutations from becoming permanent in dividing cells. MMR also suppresses homologous recombination and was recently shown to play a role in DNA damage signaling. Defects in MMR are associated with genome-wide instability, predisposition to certain types of cancer including HNPCC, resistance to certain chemotherapeutic agents, and abnormalities in meiosis and sterility in mammalian systems.
The Escherichia coli MMR pathway has been extensively studied and is well characterized. In E. coli, the mismatch-activated MutS-MutL-ATP complex licenses MutH to incise the nearest unmethylated GATC sequence. UvrD and an exonuclease generate a gap. This gap is filled by pol III and DNA ligase. The GATC sites are then methylated by Dam. Several human MMR proteins have been identified based on their homology to E. coli MMR proteins. These include human homologs of MutS and MutL. Although E. coli MutS and MutL proteins are homodimers, human MutS and MutL homologs are heterodimers. The role of hemimethylated dGATC sites as a signal for strand discrimination is not conserved from E. coli to human. Human MMR is presumed to be nick-directed in vivo, and is thought to discriminate daughter and template strands using a strand-specific nick.
Class
Genetic Information Processing; Replication and repair
Pathway map
gla03430  Mismatch repair
gla03430

Other DBs
GO: 0006298
Organism
Giardia lamblia [GN:gla]
Gene
GL50803_0016149  Mlh1-like protein [KO:K08734]
GL50803_0034058  Mismatch repair protein [KO:K08737]
GL50803_00113252  Msh2-like protein [KO:K08735]
GL50803_0015392  Replication factor C, subunit 1 [KO:K10754]
GL50803_0014095  Replication factor C, subunit 4 [KO:K10755]
GL50803_009287  Replication factor C, sub 2 [KO:K10755]
GL50803_0016127  Replication factor C, subunit 5 [KO:K10756]
GL50803_0024636  Replication factor C, subunit 3 [KO:K10756]
GL50803_006564  Proliferating cell nuclear antigen [KO:K04802]
GL50803_009922  Exonuclease 1 [KO:K10746] [EC:3.1.-.-]
GL50803_0010775  DNA-directed DNA polymerase [KO:K02328]
Reference
  Authors
Jiricny J.
  Title
The multifaceted mismatch-repair system.
  Journal
Nat Rev Mol Cell Biol 7:335-46 (2006)
DOI:10.1038/nrm1907
Reference
  Authors
Li GM.
  Title
Mechanisms and functions of DNA mismatch repair.
  Journal
Cell Res 18:85-98 (2008)
DOI:10.1038/cr.2007.115
Reference
  Authors
Marti TM, Kunz C, Fleck O.
  Title
DNA mismatch repair and mutation avoidance pathways.
  Journal
J Cell Physiol 191:28-41 (2002)
DOI:10.1002/jcp.10077
Reference
  Authors
Ikejima M, Shimada T.
  Title
[Molecular mechanism of mismatch repair]
  Journal
Tanpakushitsu Kakusan Koso 46:1124-9 (2001)
KO pathway
ko03430   

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