KEGG   PATHWAY: lif03013
Entry
lif03013                    Pathway                                
Name
Nucleocytoplasmic transport - Leishmania infantum
Description
The exchange of molecules between the nucleus and cytoplasm is mediated through nuclear pore complexes (NPCs) embedded in the nuclear envelope. The NPC is composed of highly conserved, distinct structural modules: the inner pore ring, the cytoplasmic and nuclear rings as well as the cytoplasmic filaments and the nuclear basket. Nuclear transport receptors (e.g. importins and exportins) mediate translocation of cargos through the NPC. Cargo proteins harbouring a nuclear export signal (NES) bind to exportins and Ran-GTP to form an export complex in the nucleoplasm. Nuclear export of bulk mRNA is provided by the non-karyopherin transport proteins TAP-p15 in a Ran-GTP-independent manner. Several EJC factors are known to function in mRNA export.
Class
Genetic Information Processing; Translation
Pathway map
lif03013  Nucleocytoplasmic transport
lif03013

Other DBs
GO: 0050658
Organism
Leishmania infantum [GN:lif]
Gene
LINJ_01_0330  putative poly(A) export protein [KO:K14298]
LINJ_27_0390  putative nucleoporin [KO:K14297]
LINJ_02_0360  putative ubiquitin-conjugating enzyme E2 [KO:K10577]
LINJ_32_0050  putative protein transport protein Sec13 [KO:K14004]
LINJ_32_2530  conserved hypothetical protein [KO:K14306]
LINJ_36_7220  putative nuclear pore complex protein (NUP155) [KO:K14312]
LINJ_30_1180  putative importin alpha [KO:K15042]
LINJ_34_0510  putative importin beta-1 subunit [KO:K14293]
LINJ_35_2380  conserved hypothetical protein [KO:K18727]
LINJ_07_0810  conserved hypothetical protein [KO:K20221]
LINJ_32_2280  conserved hypothetical protein [KO:K20222]
LINJ_13_0530  conserved hypothetical protein [KO:K20223]
LINJ_29_2180  conserved hypothetical protein [KO:K20223]
LINJ_32_1160  putative exportin 1 [KO:K14290]
LINJ_30_3440  putative CAS/CSE/importin domain protein [KO:K18423]
LINJ_02_0090  exportin T (tRNA exportin)-like protein [KO:K14288]
LINJ_10_1300  conserved hypothetical protein [KO:K18460]
LINJ_25_1460  putative GTP-binding protein [KO:K07936]
LINJ_17_0090  elongation factor 1-alpha [KO:K03231]
LINJ_17_0110  elongation factor 1-alpha [KO:K03231]
LINJ_17_0200  elongation factor 1-alpha [KO:K03231]
LINJ_17_0190  elongation factor 1-alpha [KO:K03231]
LINJ_17_0170  elongation factor 1-alpha [KO:K03231]
LINJ_17_0100  elongation factor 1-alpha [KO:K03231]
LINJ_17_0180  elongation factor 1-alpha [KO:K03231]
LINJ_30_0560  putative nuclear cap binding protein [KO:K12883]
LINJ_26_0940  conserved hypothetical protein [KO:K07562]
LINJ_26_0750  conserved hypothetical protein [KO:K12876]
LINJ_30_3620  putative mago nashi-like protein [KO:K12877]
LINJ_28_1660  putative DEAD box RNA helicase [KO:K13025] [EC:5.6.2.7]
LINJ_27_1590  conserved hypothetical protein [KO:K14284]
LINJ_06_1210  putative nuclear transport factor 2 protein(NFT2) [KO:K14285]
LINJ_21_1820  putative RNA helicase [KO:K12812] [EC:5.6.2.7]
Reference
  Authors
Tran EJ, Wente SR
  Title
Dynamic nuclear pore complexes: life on the edge.
  Journal
Cell 125:1041-53 (2006)
DOI:10.1016/j.cell.2006.05.027
Reference
  Authors
Rodriguez MS, Dargemont C, Stutz F
  Title
Nuclear export of RNA.
  Journal
Biol Cell 96:639-55 (2004)
DOI:10.1016/j.biolcel.2004.04.014
Reference
  Authors
Palancade B, Doye V
  Title
Sumoylating and desumoylating enzymes at nuclear pores: underpinning their unexpected duties?
  Journal
Trends Cell Biol 18:174-83 (2008)
DOI:10.1016/j.tcb.2008.02.001
Reference
  Authors
Reed R, Cheng H
  Title
TREX, SR proteins and export of mRNA.
  Journal
Curr Opin Cell Biol 17:269-73 (2005)
DOI:10.1016/j.ceb.2005.04.011
Reference
  Authors
Tange TO, Shibuya T, Jurica MS, Moore MJ
  Title
Biochemical analysis of the EJC reveals two new factors and a stable tetrameric protein core.
  Journal
RNA 11:1869-83 (2005)
DOI:10.1261/rna.2155905
Reference
  Authors
Beck M, Schirmacher P, Singer S
  Title
Alterations of the nuclear transport system in hepatocellular carcinoma - New basis for therapeutic strategies.
  Journal
J Hepatol 67:1051-1061 (2017)
DOI:10.1016/j.jhep.2017.06.021
Related
pathway
lif03015  mRNA surveillance pathway
KO pathway
ko03013   

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