KEGG   PATHWAY: lif04144
Entry
lif04144                    Pathway                                
Name
Endocytosis - Leishmania infantum
Description
Endocytosis is a mechanism for cells to remove ligands, nutrients, and plasma membrane (PM) proteins, and lipids from the cell surface, bringing them into the cell interior. Transmembrane proteins entering through clathrin-dependent endocytosis (CDE) have sequences in their cytoplasmic domains that bind to the APs (adaptor-related protein complexes) and enable their rapid removal from the PM. In addition to APs and clathrin, there are numerous accessory proteins including dynamin. Depending on the various proteins that enter the endosome membrane, these cargoes are sorted to distinct destinations. Some cargoes, such as nutrient receptors, are recycled back to the PM. Ubiquitylated membrane proteins, such as activated growth-factor receptors, are sorted into intraluminal vesicles and eventually end up in the lysosome lumen via multivesicular endosomes (MVEs). There are distinct mechanisms of clathrin-independent endocytosis (CIE) depending upon the cargo and the cell type.
Class
Cellular Processes; Transport and catabolism
Pathway map
lif04144  Endocytosis
lif04144

Other DBs
GO: 0006897
Organism
Leishmania infantum [GN:lif]
Gene
LINJ_36_1700  putative clathrin heavy chain [KO:K04646]
LINJ_07_0060  alpha-adaptin-like protein [KO:K11824]
LINJ_36_3180  clathrin coat assembly protein-like protein [KO:K11826]
LINJ_34_2100  putative clathrin coat assembly protein AP17 [KO:K11827]
LINJ_25_0680  putative epsin [KO:K12471]
LINJ_19_1190  putative actin-related protein 2 [KO:K17260]
LINJ_15_1410  actin-related protein 3, putative arp3 [KO:K18584]
LINJ_02_0570  putative ARP2/3 complex subunit [KO:K05755]
LINJ_28_2960  putative heat-shock protein hsp70 [KO:K03283]
LINJ_28_3060  putative heat-shock protein hsp70 [KO:K03283]
LINJ_28_3000  putative heat-shock protein hsp70 [KO:K03283]
LINJ_28_3040  putative heat shock protein 70 [KO:K03283]
LINJ_28_2950  putative heat-shock protein hsp70 [KO:K03283]
LINJ_26_1220  HSP70.4; heat shock protein 70-related protein [KO:K03283]
LINJ_24_1320  conserved hypothetical protein [KO:K18465]
LINJ_27_1560  conserved hypothetical protein [KO:K18464]
LINJ_32_1110  vacuolar sorting-like protein [KO:K18467]
LINJ_36_3580  vacuolar protein sorting-associated protein-like protein [KO:K18466]
LINJ_21_0530  vacuolar sorting-associated-like protein [KO:K18468]
LINJ_18_0890  RAB7; putative rab7 GTP binding protein [KO:K07897]
LINJ_36_5400  vacuolar protein sorting-associated protein-like protein [KO:K12184]
LINJ_34_1570  conserved hypothetical protein [KO:K12188]
LINJ_19_0740  conserved hypothetical protein [KO:K12190]
LINJ_36_0330  putative dolicholphosphate-mannose synthase [KO:K12189]
LINJ_16_0940  conserved hypothetical protein [KO:K12195]
LINJ_36_4040  conserved hypothetical protein [KO:K12194]
LINJ_36_3600  SNF7-like protein [KO:K12193]
LINJ_27_1350  conserved hypothetical protein [KO:K12191]
LINJ_29_2610  VPS4; vacuolar protein sorting-associated protein 4 [KO:K12196]
LINJ_34_3130  ATPase-like protein [KO:K12196]
LINJ_05_0740  conserved hypothetical protein [KO:K12199]
LINJ_35_4470  conserved hypothetical protein [KO:K12197]
LINJ_33_2010  putative vesicular protein trafficking mediator [KO:K12197]
LINJ_35_0580  conserved SNF-7-like protein [KO:K12198]
LINJ_27_1540  conserved hypothetical protein [KO:K12200]
LINJ_13_0220  putative small Rab GTP binding protein [KO:K07889]
LINJ_36_2360  vacuolar protein sorting-associated protein 45-like protein [KO:K12479]
LINJ_10_0960  rab11; putative small GTP-binding protein Rab11 [KO:K07904]
LINJ_32_1650  conserved hypothetical protein [KO:K12486]
LINJ_32_1290  putative ADP-ribosylation factor GTPase activating protein 1 [KO:K12492]
LINJ_13_0600  conserved hypothetical protein [KO:K12493]
LINJ_31_2350  putative ADP-ribosylation factor [KO:K07937]
LINJ_04_0470  putative ADP-ribosylation factor [KO:K07937]
LINJ_31_2890  putative ADP-ribosylation factor [KO:K07937]
Compound
C00035  GDP
C00044  GTP
C04549  1-Phosphatidyl-1D-myo-inositol 3-phosphate
C04637  1-Phosphatidyl-D-myo-inositol 4,5-bisphosphate
C05981  Phosphatidylinositol-3,4,5-trisphosphate
C11556  1-Phosphatidyl-1D-myo-inositol 3,5-bisphosphate
Reference
  Authors
Acconcia F, Sigismund S, Polo S
  Title
Ubiquitin in trafficking: the network at work.
  Journal
Exp Cell Res 315:1610-8 (2009)
DOI:10.1016/j.yexcr.2008.10.014
Reference
  Authors
Donaldson JG, Porat-Shliom N, Cohen LA
  Title
Clathrin-independent endocytosis: a unique platform for cell signaling and PM remodeling.
  Journal
Cell Signal 21:1-6 (2009)
DOI:10.1016/j.cellsig.2008.06.020
Reference
  Authors
Sorkin A
  Title
Cargo recognition during clathrin-mediated endocytosis: a team effort.
  Journal
Curr Opin Cell Biol 16:392-9 (2004)
DOI:10.1016/j.ceb.2004.06.001
Reference
  Authors
Raiborg C, Stenmark H
  Title
The ESCRT machinery in endosomal sorting of ubiquitylated membrane proteins.
  Journal
Nature 458:445-52 (2009)
DOI:10.1038/nature07961
Reference
  Authors
Scita G, Di Fiore PP
  Title
The endocytic matrix.
  Journal
Nature 463:464-73 (2010)
DOI:10.1038/nature08910
Reference
  Authors
Le Roy C, Wrana JL
  Title
Clathrin- and non-clathrin-mediated endocytic regulation of cell signalling.
  Journal
Nat Rev Mol Cell Biol 6:112-26 (2005)
DOI:10.1038/nrm1571
Reference
  Authors
Jovic M, Sharma M, Rahajeng J, Caplan S
  Title
The early endosome: a busy sorting station for proteins at the crossroads.
  Journal
Histol Histopathol 25:99-112 (2010)
DOI:10.14670/HH-25.99
Reference
  Authors
Pietiainen VM, Marjomaki V, Heino J, Hyypia T
  Title
Viral entry, lipid rafts and caveosomes.
  Journal
Ann Med 37:394-403 (2005)
DOI:10.1080/07853890510011976
Reference
  Authors
Grant BD, Donaldson JG
  Title
Pathways and mechanisms of endocytic recycling.
  Journal
Nat Rev Mol Cell Biol 10:597-608 (2009)
DOI:10.1038/nrm2755
Reference
  Authors
Cullen PJ, Korswagen HC
  Title
Sorting nexins provide diversity for retromer-dependent trafficking events.
  Journal
Nat Cell Biol 14:29-37 (2012)
DOI:10.1038/ncb2374
Related
pathway
lif04070  Phosphatidylinositol signaling system
lif04130  SNARE interactions in vesicular transport
KO pathway
ko04144   

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