KEGG   PATHWAY: lma03030
Entry
lma03030                    Pathway                                
Name
DNA replication - Leishmania major
Description
A complex network of interacting proteins and enzymes is required for DNA replication. Generally, DNA replication follows a multistep enzymatic pathway. At the DNA replication fork, a DNA helicase (DnaB or MCM complex) precedes the DNA synthetic machinery and unwinds the duplex parental DNA in cooperation with the SSB or RPA. On the leading strand, replication occurs continuously in a 5 to 3 direction, whereas on the lagging strand, DNA replication occurs discontinuously by synthesis and joining of short Okazaki fragments. In prokaryotes, the leading strand replication apparatus consists of a DNA polymerase (pol III core), a sliding clamp (beta), and a clamp loader (gamma delta complex). The DNA primase (DnaG) is needed to form RNA primers. Normally, during replication of the lagging-strand DNA template, an RNA primer is removed either by an RNase H or by the 5 to 3 exonuclease activity of DNA pol I, and the DNA ligase joins the Okazaki fragments. In eukaryotes, three DNA polymerases (alpha, delta, and epsilon) have been identified. DNA primase forms a permanent complex with DNA polymerase alpha. PCNA and RFC function as a clamp and a clamp loader. FEN 1 and RNase H1 remove the RNA from the Okazaki fragments and DNA ligase I joins the DNA.
Class
Genetic Information Processing; Replication and repair
Pathway map
lma03030  DNA replication
lma03030

Organism
Leishmania major [GN:lma]
Gene
LMJF_06_0290  putative ribonuclease H1 [KO:K03469] [EC:3.1.26.4]
LMJF_34_0450  hypothetical protein [KO:K03469] [EC:3.1.26.4]
LMJF_13_0050  putative ribonuclease HII [KO:K03470] [EC:3.1.26.4]
LMJF_36_0330  RNHii; putative ribonuclease HII [KO:K03470] [EC:3.1.26.4]
LMJF_28_1820  RPA1; putative replication factor A, 51kDa subunit [KO:K07466]
LMJF_15_1450  putative proliferative cell nuclear antigen (PCNA) [KO:K04802]
LMJF_27_0250  putative flap endonuclease-1 (FEN-1) [KO:K04799] [EC:3.1.-.-]
LMJF_30_3440  putative DNA ligase I [KO:K10747] [EC:6.5.1.1 6.5.1.6 6.5.1.7]
LMJF_16_1540  putative DNA polymerase I alpha catalytic subunit [KO:K02320] [EC:2.7.7.7]
LMJF_32_1720  hypothetical protein [KO:K02321]
LMJF_22_0390  putative DNA primase small subunit [KO:K02684] [EC:2.7.7.102]
LMJF_03_0090  putative DNA primase large subunit [KO:K02685]
LMJF_33_1690  putative DNA polymerase delta catalytic subunit [KO:K02327] [EC:2.7.7.7]
LMJF_25_1410  putative DNA polymerase delta subunit 2 [KO:K02328]
LMJF_35_4360  putative DNA polymerase epsilon catalytic subunit [KO:K02324] [EC:2.7.7.7]
LMJF_35_1790  putative DNA polymerase epsilon subunit B [KO:K02325] [EC:2.7.7.7]
LMJF_28_0850  putative minichromosome maintenance (MCM) complex subunit [KO:K02540] [EC:5.6.2.3]
LMJF_33_2700  putative minichromosome maintenance (MCM) complex subunit [KO:K02541] [EC:5.6.2.3]
LMJF_09_0250  putative minchromosome maintenance (MCM) complex subunit [KO:K02212] [EC:5.6.2.3]
LMJF_24_0910  putative minchromosome maintenance (MCM) complex subunit [KO:K02209] [EC:5.6.2.3]
LMJF_28_2385  putative DNA replication licensing factor [KO:K02542] [EC:5.6.2.3]
LMJF_32_2960  putative minichromosome maintenance (MCM) complex subunit [KO:K02210] [EC:5.6.2.3]
LMJF_15_0270  putative replication Factor A 28 kDa subunit [KO:K10739]
LMJF_24_0990  putative replication factor C, subunit 1 [KO:K10754]
LMJF_30_2630  putative replication factor C, subunit 2 [KO:K10755]
LMJF_27_0550  putative replication factor C, subunit 4 [KO:K10755]
LMJF_36_6710  putative replication factor C, subunit 5 [KO:K10756]
LMJF_35_3250  putative replication factor C, subunit 3 [KO:K10756]
LMJF_36_0640  putative ribonuclease H [KO:K10743] [EC:3.1.26.4]
Reference
PMID:8087839
  Authors
Stillman B.
  Title
Smart machines at the DNA replication fork.
  Journal
Cell 78:725-8 (1994)
DOI:10.1016/S0092-8674(94)90362-X
Reference
PMID:9759502
  Authors
Waga S, Stillman B.
  Title
The DNA replication fork in eukaryotic cells.
  Journal
Annu Rev Biochem 67:721-51 (1998)
DOI:10.1146/annurev.biochem.67.1.721
KO pathway
ko03030   

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