KEGG   PATHWAY: lma03430
Entry
lma03430                    Pathway                                
Name
Mismatch repair - Leishmania major
Description
DNA mismatch repair (MMR) is a highly conserved biological pathway that plays a key role in maintaining genomic stability. MMR corrects DNA mismatches generated during DNA replication, thereby preventing mutations from becoming permanent in dividing cells. MMR also suppresses homologous recombination and was recently shown to play a role in DNA damage signaling. Defects in MMR are associated with genome-wide instability, predisposition to certain types of cancer including HNPCC, resistance to certain chemotherapeutic agents, and abnormalities in meiosis and sterility in mammalian systems.
The Escherichia coli MMR pathway has been extensively studied and is well characterized. In E. coli, the mismatch-activated MutS-MutL-ATP complex licenses MutH to incise the nearest unmethylated GATC sequence. UvrD and an exonuclease generate a gap. This gap is filled by pol III and DNA ligase. The GATC sites are then methylated by Dam. Several human MMR proteins have been identified based on their homology to E. coli MMR proteins. These include human homologs of MutS and MutL. Although E. coli MutS and MutL proteins are homodimers, human MutS and MutL homologs are heterodimers. The role of hemimethylated dGATC sites as a signal for strand discrimination is not conserved from E. coli to human. Human MMR is presumed to be nick-directed in vivo, and is thought to discriminate daughter and template strands using a strand-specific nick.
Class
Genetic Information Processing; Replication and repair
Pathway map
lma03430  Mismatch repair
lma03430

Other DBs
GO: 0006298
Organism
Leishmania major [GN:lma]
Gene
LMJF_35_1660  mismatch repair protein [KO:K10858]
LMJF_24_1420  putative mismatch repair protein [KO:K08734]
LMJF_33_0410  putative DNA mismatch repair protein [KO:K08735]
LMJF_15_1420  putative mismatch repair protein MSH3 [KO:K08736]
LMJF_24_0990  putative replication factor C, subunit 1 [KO:K10754]
LMJF_30_2630  putative replication factor C, subunit 2 [KO:K10755]
LMJF_27_0550  putative replication factor C, subunit 4 [KO:K10755]
LMJF_36_6710  putative replication factor C, subunit 5 [KO:K10756]
LMJF_35_3250  putative replication factor C, subunit 3 [KO:K10756]
LMJF_15_1450  putative proliferative cell nuclear antigen (PCNA) [KO:K04802]
LMJF_23_1270  hypothetical protein [KO:K10746] [EC:3.1.-.-]
LMJF_28_1820  RPA1; putative replication factor A, 51kDa subunit [KO:K07466]
LMJF_15_0270  putative replication Factor A 28 kDa subunit [KO:K10739]
LMJF_33_1690  putative DNA polymerase delta catalytic subunit [KO:K02327] [EC:2.7.7.7]
LMJF_25_1410  putative DNA polymerase delta subunit 2 [KO:K02328]
LMJF_30_3440  putative DNA ligase I [KO:K10747] [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Reference
  Authors
Jiricny J.
  Title
The multifaceted mismatch-repair system.
  Journal
Nat Rev Mol Cell Biol 7:335-46 (2006)
DOI:10.1038/nrm1907
Reference
  Authors
Li GM.
  Title
Mechanisms and functions of DNA mismatch repair.
  Journal
Cell Res 18:85-98 (2008)
DOI:10.1038/cr.2007.115
Reference
  Authors
Marti TM, Kunz C, Fleck O.
  Title
DNA mismatch repair and mutation avoidance pathways.
  Journal
J Cell Physiol 191:28-41 (2002)
DOI:10.1002/jcp.10077
Reference
  Authors
Ikejima M, Shimada T.
  Title
[Molecular mechanism of mismatch repair]
  Journal
Tanpakushitsu Kakusan Koso 46:1124-9 (2001)
KO pathway
ko03430   

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