KEGG   PATHWAY: lma04144
Entry
lma04144                    Pathway                                
Name
Endocytosis - Leishmania major
Description
Endocytosis is a mechanism for cells to remove ligands, nutrients, and plasma membrane (PM) proteins, and lipids from the cell surface, bringing them into the cell interior. Transmembrane proteins entering through clathrin-dependent endocytosis (CDE) have sequences in their cytoplasmic domains that bind to the APs (adaptor-related protein complexes) and enable their rapid removal from the PM. In addition to APs and clathrin, there are numerous accessory proteins including dynamin. Depending on the various proteins that enter the endosome membrane, these cargoes are sorted to distinct destinations. Some cargoes, such as nutrient receptors, are recycled back to the PM. Ubiquitylated membrane proteins, such as activated growth-factor receptors, are sorted into intraluminal vesicles and eventually end up in the lysosome lumen via multivesicular endosomes (MVEs). There are distinct mechanisms of clathrin-independent endocytosis (CIE) depending upon the cargo and the cell type.
Class
Cellular Processes; Transport and catabolism
Pathway map
lma04144  Endocytosis
lma04144

Other DBs
GO: 0006897
Organism
Leishmania major [GN:lma]
Gene
LMJF_34_3090  phosphatidylinositol-4-phosphate-5-kinase-likep ro tein [KO:K00889] [EC:2.7.1.68]
LMJF_36_1630  putative clathrin heavy chain [KO:K04646]
LMJF_07_0050  alpha-adaptin-like protein [KO:K11824]
LMJF_36_3030  clathrin coat assembly protein-like protein [KO:K11826]
LMJF_34_2330  putative clathrin coat assembly protein AP17 [KO:K11827]
LMJF_25_0670  putative epsin [KO:K12471]
LMJF_19_1200  putative actin-related protein 2 [KO:K17260]
LMJF_15_1360  putative actin-related protein 3 arp3 [KO:K18584]
LMJF_02_0600  putative ARP2/3 complex subunit [KO:K05755]
LMJF_28_2780  putative heat-shock protein hsp70 [KO:K03283]
LMJF_28_2770  putative heat-shock protein hsp70 [KO:K03283]
LMJF_28_2820  putative heat shock protein 70 [KO:K03283]
LMJF_26_1240  HSP70.4; heat shock protein 70-related protein [KO:K03283]
LMJF_24_1290  hypothetical protein [KO:K18465]
LMJF_27_1660  hypothetical protein [KO:K18464]
LMJF_32_1050  vacuolar sorting-like protein [KO:K18467]
LMJF_36_3420  vacuolar protein sorting-associated protein-like protein [KO:K18466]
LMJF_21_0470  vacuolar sorting-associated-like protein [KO:K18468]
LMJF_18_0890  RAB7; putative rab7 GTP binding protein [KO:K07897]
LMJF_36_5170  vacuolar protein sorting-associated protein-like protein [KO:K12184]
LMJF_34_1470  hypothetical protein [KO:K12188]
LMJF_19_0740  hypothetical protein [KO:K12190]
LMJF_36_0310  putative dolicholphosphate-mannose synthase [KO:K12189]
LMJF_16_0930  hypothetical protein [KO:K12195]
LMJF_36_3850  hypothetical protein [KO:K12194]
LMJF_36_3440  SNF7-like protein [KO:K12193]
LMJF_27_1440  hypothetical protein [KO:K12191]
LMJF_34_3350  ATPase-like protein [KO:K12196]
LMJF_29_2500  VPS4; vacuolar protein sorting-associated protein 4 [KO:K12196]
LMJF_05_0740  hypothetical protein [KO:K12199]
LMJF_33_1900  putative vesicular protein trafficking mediator [KO:K12197]
LMJF_35_4400  hypothetical protein [KO:K12197]
LMJF_35_0580  conserved SNF-7-like protein [KO:K12198]
LMJF_27_1640  hypothetical protein [KO:K12200]
LMJF_13_0220  putative small Rab GTP binding protein [KO:K07889]
LMJF_36_2230  vacuolar protein sorting-associated protein 45-like protein [KO:K12479]
LMJF_10_0910  rab11; putative small GTP-binding protein Rab11 [KO:K07904]
LMJF_32_1570  hypothetical protein [KO:K12486]
LMJF_32_1230  putative ADP-ribosylation factor GTPase activating protein 1 [KO:K12492]
LMJF_13_0710  hypothetical protein [KO:K12493]
LMJF_31_2280  putative ADP-ribosylation factor [KO:K07937]
LMJF_04_0480  putative ADP-ribosylation factor [KO:K07937]
LMJF_31_2790  putative ADP-ribosylation factor [KO:K07937]
Compound
C00035  GDP
C00044  GTP
C04549  1-Phosphatidyl-1D-myo-inositol 3-phosphate
C04637  1-Phosphatidyl-D-myo-inositol 4,5-bisphosphate
C05981  Phosphatidylinositol-3,4,5-trisphosphate
C11556  1-Phosphatidyl-1D-myo-inositol 3,5-bisphosphate
Reference
  Authors
Acconcia F, Sigismund S, Polo S
  Title
Ubiquitin in trafficking: the network at work.
  Journal
Exp Cell Res 315:1610-8 (2009)
DOI:10.1016/j.yexcr.2008.10.014
Reference
  Authors
Donaldson JG, Porat-Shliom N, Cohen LA
  Title
Clathrin-independent endocytosis: a unique platform for cell signaling and PM remodeling.
  Journal
Cell Signal 21:1-6 (2009)
DOI:10.1016/j.cellsig.2008.06.020
Reference
  Authors
Sorkin A
  Title
Cargo recognition during clathrin-mediated endocytosis: a team effort.
  Journal
Curr Opin Cell Biol 16:392-9 (2004)
DOI:10.1016/j.ceb.2004.06.001
Reference
  Authors
Raiborg C, Stenmark H
  Title
The ESCRT machinery in endosomal sorting of ubiquitylated membrane proteins.
  Journal
Nature 458:445-52 (2009)
DOI:10.1038/nature07961
Reference
  Authors
Scita G, Di Fiore PP
  Title
The endocytic matrix.
  Journal
Nature 463:464-73 (2010)
DOI:10.1038/nature08910
Reference
  Authors
Le Roy C, Wrana JL
  Title
Clathrin- and non-clathrin-mediated endocytic regulation of cell signalling.
  Journal
Nat Rev Mol Cell Biol 6:112-26 (2005)
DOI:10.1038/nrm1571
Reference
  Authors
Jovic M, Sharma M, Rahajeng J, Caplan S
  Title
The early endosome: a busy sorting station for proteins at the crossroads.
  Journal
Histol Histopathol 25:99-112 (2010)
DOI:10.14670/HH-25.99
Reference
  Authors
Pietiainen VM, Marjomaki V, Heino J, Hyypia T
  Title
Viral entry, lipid rafts and caveosomes.
  Journal
Ann Med 37:394-403 (2005)
DOI:10.1080/07853890510011976
Reference
  Authors
Grant BD, Donaldson JG
  Title
Pathways and mechanisms of endocytic recycling.
  Journal
Nat Rev Mol Cell Biol 10:597-608 (2009)
DOI:10.1038/nrm2755
Reference
  Authors
Cullen PJ, Korswagen HC
  Title
Sorting nexins provide diversity for retromer-dependent trafficking events.
  Journal
Nat Cell Biol 14:29-37 (2012)
DOI:10.1038/ncb2374
Related
pathway
lma04070  Phosphatidylinositol signaling system
lma04130  SNARE interactions in vesicular transport
KO pathway
ko04144   

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