KEGG   PATHWAY: nca00310
Entry
nca00310                    Pathway                                
Name
Lysine degradation - Nocardioides sp. JS614
Class
Metabolism; Amino acid metabolism
Pathway map
nca00310  Lysine degradation
nca00310

Other DBs
GO: 0006554
Organism
Nocardioides sp. JS614 [GN:nca]
Gene
Noca_3221  Saccharopine dehydrogenase [KO:K00290] [EC:1.5.1.7]
Noca_3518  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
Noca_2304  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
Noca_4292  acyl-CoA dehydrogenase domain protein [KO:K00252] [EC:1.3.8.6]
Noca_1813  short chain enoyl-CoA hydratase [KO:K01692] [EC:4.2.1.17]
Noca_1521  short chain enoyl-CoA hydratase / Enoyl-CoA hydratase [KO:K01692] [EC:4.2.1.17]
Noca_4562  3-hydroxyacyl-CoA dehydrogenase [KO:K01782] [EC:1.1.1.35 4.2.1.17 5.1.2.3]
Noca_1371  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
Noca_1797  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
Noca_1828  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
Noca_4142  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
Noca_2734  peptidase M22, glycoprotease [KO:K00626] [EC:2.3.1.9]
Noca_2740  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
Noca_2764  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
Noca_2847  3-ketoacyl-CoA thiolase [KO:K00626] [EC:2.3.1.9]
Noca_4563  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
Noca_0645  4-aminobutyrate aminotransferase apoenzyme [KO:K07250] [EC:2.6.1.19 2.6.1.22 2.6.1.48]
Noca_3205  4-aminobutyrate aminotransferase apoenzyme [KO:K07250] [EC:2.6.1.19 2.6.1.22 2.6.1.48]
Noca_0646  succinate semialdehyde dehydrogenase [KO:K00135] [EC:1.2.1.16 1.2.1.79 1.2.1.20]
Noca_0692  succinate semialdehyde dehydrogenase [KO:K00135] [EC:1.2.1.16 1.2.1.79 1.2.1.20]
Noca_1116  succinate semialdehyde dehydrogenase [KO:K00135] [EC:1.2.1.16 1.2.1.79 1.2.1.20]
Noca_4188  aldehyde dehydrogenase [KO:K00135] [EC:1.2.1.16 1.2.1.79 1.2.1.20]
Noca_4473  succinate semialdehyde dehydrogenase [KO:K00135] [EC:1.2.1.16 1.2.1.79 1.2.1.20]
Noca_4598  succinate semialdehyde dehydrogenase [KO:K00135] [EC:1.2.1.16 1.2.1.79 1.2.1.20]
Noca_3633  aldehyde dehydrogenase [KO:K00135] [EC:1.2.1.16 1.2.1.79 1.2.1.20]
Noca_1188  aldehyde dehydrogenase [KO:K00135] [EC:1.2.1.16 1.2.1.79 1.2.1.20]
Noca_4004  Aldehyde dehydrogenase (NAD(+)) [KO:K00135] [EC:1.2.1.16 1.2.1.79 1.2.1.20]
Noca_0034  FAD dependent oxidoreductase [KO:K15736] [EC:1.1.5.13]
Noca_2661  L-lysine 2,3-aminomutase [KO:K01843] [EC:5.4.3.2]
Noca_2663  D-lysine 5,6-aminomutase alpha subunit [KO:K01844] [EC:5.4.3.3]
Noca_2664  beta-lysine 5,6-aminomutase beta subunit / D-lysine 5,6-aminomutase beta subunit [KO:K18011] [EC:5.4.3.3]
Noca_2662  L-erythro-3,5-diaminohexanoate dehydrogenase [KO:K18012] [EC:1.4.1.11]
Noca_4226  3-keto-5-aminohexanoate cleavage enzyme [KO:K18013] [EC:2.3.1.247]
Noca_2665  3-aminobutyryl-CoA ammonia-lyase [KO:K18014] [EC:4.3.1.14]
Noca_3634  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
Noca_3529  aldehyde dehydrogenase (acceptor) [KO:K00128] [EC:1.2.1.3]
Compound
C00024  Acetyl-CoA
C00026  2-Oxoglutarate
C00037  Glycine
C00042  Succinate
C00047  L-Lysine
C00068  Thiamin diphosphate
C00136  Butanoyl-CoA
C00164  Acetoacetate
C00322  2-Oxoadipate
C00332  Acetoacetyl-CoA
C00408  L-Pipecolate
C00431  5-Aminopentanoate
C00449  N6-(L-1,3-Dicarboxypropyl)-L-lysine
C00450  (S)-2,3,4,5-Tetrahydropyridine-2-carboxylate
C00487  Carnitine
C00489  Glutarate
C00527  Glutaryl-CoA
C00739  D-Lysine
C00877  Crotonoyl-CoA
C00956  L-2-Aminoadipate
C00990  5-Aminopentanamide
C01087  (R)-2-Hydroxyglutarate
C01142  (3S)-3,6-Diaminohexanoate
C01144  (S)-3-Hydroxybutanoyl-CoA
C01149  4-Trimethylammoniobutanal
C01181  4-Trimethylammoniobutanoate
C01186  (3S,5S)-3,5-Diaminohexanoate
C01211  Procollagen 5-hydroxy-L-lysine
C01259  (3S)-3-Hydroxy-N6,N6,N6-trimethyl-L-lysine
C01672  Cadaverine
C02188  Protein lysine
C02727  N6-Acetyl-L-lysine
C03087  5-Acetamidopentanoate
C03196  (S)-2-Hydroxyglutarate
C03239  6-Amino-2-oxohexanoate
C03273  5-Oxopentanoate
C03366  5-Phosphooxy-L-lysine
C03656  (S)-5-Amino-3-oxohexanoic acid
C03793  N6,N6,N6-Trimethyl-L-lysine
C04020  D-Lysopine
C04076  L-2-Aminoadipate 6-semialdehyde
C04092  Delta1-Piperideine-2-carboxylate
C04487  5-(D-Galactosyloxy)-L-lysine-procollagen
C05161  (2R,5S)-2,5-Diaminohexanoate
C05231  L-3-Aminobutyryl-CoA
C05544  Protein N6-methyl-L-lysine
C05545  Protein N6,N6-dimethyl-L-lysine
C05546  Protein N6,N6,N6-trimethyl-L-lysine
C05548  6-Acetamido-2-oxohexanoate
C05825  2-Amino-5-oxohexanoate
C06157  [Dihydrolipoyllysine-residue succinyltransferase] S-glutaryldihydrolipoyllysine
C12455  5-Aminopentanal
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16741  L-Hydroxylysine
C22667  4-Carboxy-1-hydroxybutyryl-ThPP
Reference
PMID:11802770
  Authors
Vaz FM, Wanders RJ.
  Title
Carnitine biosynthesis in mammals.
  Journal
Biochem J 361:417-29 (2002)
DOI:10.1042/bj3610417
Reference
PMID:1682209
  Authors
Large PJ, Robertson A.
  Title
The route of lysine breakdown in Candida tropicalis.
  Journal
FEMS Microbiol Lett 66:209-13 (1991)
DOI:10.1111/j.1574-6968.1990.tb03998.x
Related
pathway
nca00020  Citrate cycle (TCA cycle)
nca00300  Lysine biosynthesis
nca00311  Penicillin and cephalosporin biosynthesis
nca00780  Biotin metabolism
KO pathway
ko00310   

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (36)   
   KEGG GENES (36)   
All databases (37)   

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