KEGG   PATHWAY: pfa03430
Entry
pfa03430                    Pathway                                
Name
Mismatch repair - Plasmodium falciparum 3D7
Description
DNA mismatch repair (MMR) is a highly conserved biological pathway that plays a key role in maintaining genomic stability. MMR corrects DNA mismatches generated during DNA replication, thereby preventing mutations from becoming permanent in dividing cells. MMR also suppresses homologous recombination and was recently shown to play a role in DNA damage signaling. Defects in MMR are associated with genome-wide instability, predisposition to certain types of cancer including HNPCC, resistance to certain chemotherapeutic agents, and abnormalities in meiosis and sterility in mammalian systems.
The Escherichia coli MMR pathway has been extensively studied and is well characterized. In E. coli, the mismatch-activated MutS-MutL-ATP complex licenses MutH to incise the nearest unmethylated GATC sequence. UvrD and an exonuclease generate a gap. This gap is filled by pol III and DNA ligase. The GATC sites are then methylated by Dam. Several human MMR proteins have been identified based on their homology to E. coli MMR proteins. These include human homologs of MutS and MutL. Although E. coli MutS and MutL proteins are homodimers, human MutS and MutL homologs are heterodimers. The role of hemimethylated dGATC sites as a signal for strand discrimination is not conserved from E. coli to human. Human MMR is presumed to be nick-directed in vivo, and is thought to discriminate daughter and template strands using a strand-specific nick.
Class
Genetic Information Processing; Replication and repair
Pathway map
pfa03430  Mismatch repair
pfa03430

Other DBs
GO: 0006298
Organism
Plasmodium falciparum 3D7 [GN:pfa]
Gene
PF3D7_0514100  ATP-dependent DNA helicase UvrD [KO:K03657] [EC:5.6.2.4]
PF3D7_0508800  single-stranded DNA-binding protein [KO:K03111]
PF3D7_0726300  DNA mismatch repair protein PMS1, putative [KO:K10858]
PF3D7_1117800  DNA mismatch repair protein MLH [KO:K08734]
PF3D7_0505500  DNA mismatch repair protein MSH6, putative [KO:K08737]
PF3D7_1427500  DNA mismatch repair protein MSH2, putative [KO:K08735]
PF3D7_0706700  DNA mismatch repair protein MSH2, putative [KO:K08735]
PF3D7_0219600  replication factor C subunit 1, putative [KO:K10754]
PF3D7_0218000  replication factor C subunit 2, putative [KO:K10755]
PF3D7_1241700  replication factor C subunit 4, putative [KO:K10755]
PF3D7_1463200  replication factor C subunit 3, putative [KO:K10756]
PF3D7_1111100  replication factor C subunit 5, putative [KO:K10756]
PF3D7_1361900  proliferating cell nuclear antigen 1 [KO:K04802]
PF3D7_1226600  proliferating cell nuclear antigen 2 [KO:K04802]
PF3D7_0725000  exonuclease I, putative [KO:K10746] [EC:3.1.-.-]
PF3D7_0409600  replication protein A1, large subunit [KO:K07466]
PF3D7_1442100  replication factor A protein 3, putative [KO:K10740]
PF3D7_1017000  DNA polymerase delta catalytic subunit [KO:K02327] [EC:2.7.7.7]
PF3D7_0308000  DNA polymerase delta small subunit, putative [KO:K02328]
PF3D7_1304100  DNA ligase I [KO:K10747] [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Reference
  Authors
Jiricny J.
  Title
The multifaceted mismatch-repair system.
  Journal
Nat Rev Mol Cell Biol 7:335-46 (2006)
DOI:10.1038/nrm1907
Reference
  Authors
Li GM.
  Title
Mechanisms and functions of DNA mismatch repair.
  Journal
Cell Res 18:85-98 (2008)
DOI:10.1038/cr.2007.115
Reference
  Authors
Marti TM, Kunz C, Fleck O.
  Title
DNA mismatch repair and mutation avoidance pathways.
  Journal
J Cell Physiol 191:28-41 (2002)
DOI:10.1002/jcp.10077
Reference
  Authors
Ikejima M, Shimada T.
  Title
[Molecular mechanism of mismatch repair]
  Journal
Tanpakushitsu Kakusan Koso 46:1124-9 (2001)
KO pathway
ko03430   

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