KEGG   PATHWAY: pkn03050
Entry
pkn03050                    Pathway                                
Name
Proteasome - Plasmodium knowlesi
Description
The proteasome is a protein-destroying apparatus involved in many essential cellular functions, such as regulation of cell cycle, cell differentiation, signal transduction pathways, antigen processing for appropriate immune responses, stress signaling, inflammatory responses, and apoptosis. It is capable of degrading a variety of cellular proteins in a rapid and timely fashion and most substrate proteins are modified by ubiquitin before their degradation by the proteasome. The proteasome is a large protein complex consisting of a proteolytic core called the 20S particle and ancillary factors that regulate its activity in various ways. The most common form is the 26S proteasome containing one 20S core particle and two 19S regulatory particles that enable the proteasome to degrade ubiquitinated proteins by an ATP-dependent mechanism. Another form is the immunoproteasome containing two 11S regulatory particles, PA28 alpha and PA28 beta, which are induced by interferon gamma under the conditions of intensified immune response. Other regulatory particles include PA28 gamma and PA200. Although PA28 gamma also belongs to a family of activators of the 20S proteasome, it is localized within the nucleus and forms a homoheptamer. PA28 gamma has been implicated in the regulation of cell cycle progression and apoptosis. PA200 has been identified as a large nuclear protein that stimulates proteasomal hydrolysis of peptides.
Class
Genetic Information Processing; Folding, sorting and degradation
Pathway map
pkn03050  Proteasome
pkn03050

Other DBs
GO: 0000502
Organism
Plasmodium knowlesi [GN:pkn]
Gene
PKNH_1263200  26S proteasome regulatory subunit RPN3, putative [KO:K03033]
PKNH_0824000  26S proteasome non-ATPase regulatory subunit 9, putative [KO:K06693]
PKNH_0602100  26S proteasome regulatory subunit p55, putative [KO:K03035]
PKNH_1355800  26S proteasome regulatory subunit RPN6, putative [KO:K03036]
PKNH_0927200  26S proteasome regulatory subunit RPN7, putative [KO:K03037]
PKNH_0710800  26S proteasome regulatory subunit RPN8, putative [KO:K03038]
PKNH_0615200  26S proteasome regulatory subunit RPN9, putative [KO:K03039]
PKNH_1103100  26S proteasome regulatory subunit RPN11, putative [KO:K03030]
PKNH_0830100  26S proteasome regulatory subunit RPN12, putative [KO:K03031]
PKNH_0317200  conserved Plasmodium protein, unknown function [KO:K10881]
PKNH_0415000  26S proteasome regulatory subunit RPN1, putative [KO:K03028]
PKNH_1215200  26S proteasome regulatory subunit RPN2, putative [KO:K03032]
PKNH_1344300  26S proteasome regulatory subunit RPN13, putative [KO:K06691]
PKNH_1411900  26S protease regulatory subunit 7, putative [KO:K03061]
PKNH_0807400  26S protease regulatory subunit 4, putative [KO:K03062]
PKNH_1468600  tat-binding-like protein [KO:K03066]
PKNH_1406600  26S protease regulatory subunit 10B, putative [KO:K03064]
PKNH_0928500  26S protease subunit regulatory subunit 6a [KO:K03065]
PKNH_0505200  26S proteasome AAA-ATPase subunit RPT3, putative [KO:K03063]
PKNH_0705500  proteasome activator 28, putative [KO:K06697]
PKNH_0111300  proteasome subunit alpha type-6, putative [KO:K02730] [EC:3.4.25.1]
PKNH_1141700  proteasome subunit alpha type-2, putative [KO:K02726] [EC:3.4.25.1]
PKNH_1117900  proteasome subunit alpha type-4, putative [KO:K02728] [EC:3.4.25.1]
PKNH_1117800  proteasome subunit alpha type-7, putative [KO:K02731] [EC:3.4.25.1]
PKNH_0212000  proteasome subunit alpha type-5, putative [KO:K02729] [EC:3.4.25.1]
PKNH_1245100  proteasome subunit alpha type-1, putative [KO:K02725] [EC:3.4.25.1]
PKNH_0824800  proteasome subunit alpha type-3, putative [KO:K02727] [EC:3.4.25.1]
PKNH_0730500  proteasome subunit beta type-6, putative [KO:K02738] [EC:3.4.25.1]
PKNH_1200500  proteasome subunit beta type-7, putative [KO:K02739] [EC:3.4.25.1]
PKNH_0205600  proteasome subunit beta type-3, putative [KO:K02735] [EC:3.4.25.1]
PKNH_1210100  proteasome subunit beta type-2, putative [KO:K02734] [EC:3.4.25.1]
PKNH_0811200  proteasome subunit beta type-5, putative [KO:K02737] [EC:3.4.25.1]
PKNH_1014900  proteasome subunit beta type-1, putative [KO:K02732] [EC:3.4.25.1]
PKNH_0115100  proteasome subunit beta type-4, putative [KO:K02736] [EC:3.4.25.1]
Reference
  Authors
Hirano Y, Murata S, Tanaka K
  Title
Large- and small-scale purification of mammalian 26S proteasomes.
  Journal
Methods Enzymol 399:227-40 (2005)
DOI:10.1016/S0076-6879(05)99015-0
Reference
  Authors
Saeki Y, Tanaka K
  Title
Cell biology: two hands for degradation.
  Journal
Nature 453:460-1 (2008)
DOI:10.1038/453460a
Reference
  Authors
Smith DM, Benaroudj N, Goldberg A
  Title
Proteasomes and their associated ATPases: a destructive combination.
  Journal
J Struct Biol 156:72-83 (2006)
DOI:10.1016/j.jsb.2006.04.012
Reference
  Authors
Strehl B, Seifert U, Kruger E, Heink S, Kuckelkorn U, Kloetzel PM
  Title
Interferon-gamma, the functional plasticity of the ubiquitin-proteasome system, and MHC class I antigen processing.
  Journal
Immunol Rev 207:19-30 (2005)
DOI:10.1111/j.0105-2896.2005.00308.x
Reference
  Authors
Darwin KH
  Title
Prokaryotic ubiquitin-like protein (Pup), proteasomes and pathogenesis.
  Journal
Nat Rev Microbiol 7:485-91 (2009)
DOI:10.1038/nrmicro2148
Reference
  Authors
Tomko RJ Jr, Hochstrasser M
  Title
Molecular architecture and assembly of the eukaryotic proteasome.
  Journal
Annu Rev Biochem 82:415-45 (2013)
DOI:10.1146/annurev-biochem-060410-150257
Reference
  Authors
Budenholzer L, Cheng CL, Li Y, Hochstrasser M
  Title
Proteasome Structure and Assembly.
  Journal
J Mol Biol 429:3500-3524 (2017)
DOI:10.1016/j.jmb.2017.05.027
Reference
  Authors
Cloos J, Roeten MS, Franke NE, van Meerloo J, Zweegman S, Kaspers GJ, Jansen G
  Title
(Immuno)proteasomes as therapeutic target in acute leukemia.
  Journal
Cancer Metastasis Rev 36:599-615 (2017)
DOI:10.1007/s10555-017-9699-4
Reference
  Authors
Sakata E, Bohn S, Mihalache O, Kiss P, Beck F, Nagy I, Nickell S, Tanaka K, Saeki Y, Forster F, Baumeister W
  Title
Localization of the proteasomal ubiquitin receptors Rpn10 and Rpn13 by electron cryomicroscopy.
  Journal
Proc Natl Acad Sci U S A 109:1479-84 (2012)
DOI:10.1073/pnas.1119394109
Related
pathway
pkn04120  Ubiquitin mediated proteolysis
KO pathway
ko03050   

DBGET integrated database retrieval system