KEGG   PATHWAY: pyo03050
Entry
pyo03050                    Pathway                                
Name
Proteasome - Plasmodium yoelii
Description
The proteasome is a protein-destroying apparatus involved in many essential cellular functions, such as regulation of cell cycle, cell differentiation, signal transduction pathways, antigen processing for appropriate immune responses, stress signaling, inflammatory responses, and apoptosis. It is capable of degrading a variety of cellular proteins in a rapid and timely fashion and most substrate proteins are modified by ubiquitin before their degradation by the proteasome. The proteasome is a large protein complex consisting of a proteolytic core called the 20S particle and ancillary factors that regulate its activity in various ways. The most common form is the 26S proteasome containing one 20S core particle and two 19S regulatory particles that enable the proteasome to degrade ubiquitinated proteins by an ATP-dependent mechanism. Another form is the immunoproteasome containing two 11S regulatory particles, PA28 alpha and PA28 beta, which are induced by interferon gamma under the conditions of intensified immune response. Other regulatory particles include PA28 gamma and PA200. Although PA28 gamma also belongs to a family of activators of the 20S proteasome, it is localized within the nucleus and forms a homoheptamer. PA28 gamma has been implicated in the regulation of cell cycle progression and apoptosis. PA200 has been identified as a large nuclear protein that stimulates proteasomal hydrolysis of peptides.
Class
Genetic Information Processing; Folding, sorting and degradation
Pathway map
pyo03050  Proteasome
pyo03050

Other DBs
GO: 0000502
Organism
Plasmodium yoelii [GN:pyo]
Gene
PY17X_1357000  uncharacterized protein [KO:K03033]
PY17X_0810600  uncharacterized protein [KO:K06693]
PY17X_0503200  26S proteasome regulatory subunit p55, putative [KO:K03035]
PY17X_1042100  26S proteasome regulatory subunit RPN6, putative [KO:K03036]
PY17X_0920700  26S proteasome regulatory subunit RPN7, putative [KO:K03037]
PY17X_0817200  26s proteasome regulatory subunit s12 [KO:K03038]
PY17X_0515500  26S proteasome regulatory subunit RPN9, putative [KO:K03039]
PY17X_1145300  26S proteasome regulatory subunit RPN11, putative [KO:K03030]
PY17X_0412800  26S proteasome regulatory subunit RPN12, putative [KO:K03031]
PY17X_0622000  conserved Plasmodium protein, unknown function [KO:K10881]
PY17X_1226100  26S proteasome regulatory subunit RPN10, putative [KO:K03029]
PY17X_0304200  uncharacterized protein [KO:K03028]
PY17X_1334400  uncharacterized protein [KO:K03032]
PY17X_1031100  26S proteasome regulatory subunit RPN13, putative [KO:K06691]
PY17X_1411800  26S protease regulatory subunit 7, putative [KO:K03061]
PY17X_1209800  26S proteasome subunit 4 protein [KO:K03062]
PY17X_1464400  uncharacterized protein [KO:K03066]
PY17X_1406600  26s protease regulatory subunit s10b [KO:K03064]
PY17X_0919400  26s protease regulatory subunit 6a [KO:K03065]
PY17X_0715800  26S protease regulatory subunit 6B, putative [KO:K03063]
PY17X_0812400  proteasome activator pa28 subunit beta [KO:K06697]
PY17X_1226300  proteasome subunit alpha type-6, putative [KO:K02730] [EC:3.4.25.1]
PY17X_0108700  proteasome subunit alpha type-2, putative [KO:K02726] [EC:3.4.25.1]
PY17X_1131800  proteasome subunit alpha type-4, putative [KO:K02728] [EC:3.4.25.1]
PY17X_1131900  multicatalytic endopeptidase Y13180 [KO:K02731] [EC:3.4.25.1]
PY17X_0212900  proteasome subunit alpha type-5, putative [KO:K02729] [EC:3.4.25.1]
PY17X_1305000  proteasome subunit alpha type-1, putative [KO:K02725] [EC:3.4.25.1]
PY17X_0811400  proteasome subunit alpha type-3, putative [KO:K02727] [EC:3.4.25.1]
PY17X_0836000  proteasome subunit beta [KO:K02738] [EC:3.4.25.1]
PY17X_1348000  proteasome subunit beta type-7, putative [KO:K02739] [EC:3.4.25.1]
PY17X_0206800  proteasome subunit beta type-3, putative [KO:K02735] [EC:3.4.25.1]
PY17X_1338800  proteasome subunit beta type-2, putative [KO:K02734] [EC:3.4.25.1]
PY17X_1213000  proteasome subunit beta type-5, putative [KO:K02737] [EC:3.4.25.1]
PY17X_1236500  proteasome subunit beta type-1, putative [KO:K02732] [EC:3.4.25.1]
PY17X_1230000  proteasome subunit beta [KO:K02736] [EC:3.4.25.1]
Reference
  Authors
Hirano Y, Murata S, Tanaka K
  Title
Large- and small-scale purification of mammalian 26S proteasomes.
  Journal
Methods Enzymol 399:227-40 (2005)
DOI:10.1016/S0076-6879(05)99015-0
Reference
  Authors
Saeki Y, Tanaka K
  Title
Cell biology: two hands for degradation.
  Journal
Nature 453:460-1 (2008)
DOI:10.1038/453460a
Reference
  Authors
Smith DM, Benaroudj N, Goldberg A
  Title
Proteasomes and their associated ATPases: a destructive combination.
  Journal
J Struct Biol 156:72-83 (2006)
DOI:10.1016/j.jsb.2006.04.012
Reference
  Authors
Strehl B, Seifert U, Kruger E, Heink S, Kuckelkorn U, Kloetzel PM
  Title
Interferon-gamma, the functional plasticity of the ubiquitin-proteasome system, and MHC class I antigen processing.
  Journal
Immunol Rev 207:19-30 (2005)
DOI:10.1111/j.0105-2896.2005.00308.x
Reference
  Authors
Darwin KH
  Title
Prokaryotic ubiquitin-like protein (Pup), proteasomes and pathogenesis.
  Journal
Nat Rev Microbiol 7:485-91 (2009)
DOI:10.1038/nrmicro2148
Reference
  Authors
Tomko RJ Jr, Hochstrasser M
  Title
Molecular architecture and assembly of the eukaryotic proteasome.
  Journal
Annu Rev Biochem 82:415-45 (2013)
DOI:10.1146/annurev-biochem-060410-150257
Reference
  Authors
Budenholzer L, Cheng CL, Li Y, Hochstrasser M
  Title
Proteasome Structure and Assembly.
  Journal
J Mol Biol 429:3500-3524 (2017)
DOI:10.1016/j.jmb.2017.05.027
Reference
  Authors
Cloos J, Roeten MS, Franke NE, van Meerloo J, Zweegman S, Kaspers GJ, Jansen G
  Title
(Immuno)proteasomes as therapeutic target in acute leukemia.
  Journal
Cancer Metastasis Rev 36:599-615 (2017)
DOI:10.1007/s10555-017-9699-4
Reference
  Authors
Sakata E, Bohn S, Mihalache O, Kiss P, Beck F, Nagy I, Nickell S, Tanaka K, Saeki Y, Forster F, Baumeister W
  Title
Localization of the proteasomal ubiquitin receptors Rpn10 and Rpn13 by electron cryomicroscopy.
  Journal
Proc Natl Acad Sci U S A 109:1479-84 (2012)
DOI:10.1073/pnas.1119394109
Related
pathway
pyo04120  Ubiquitin mediated proteolysis
KO pathway
ko03050   

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