KEGG   PATHWAY: pyo04144
Entry
pyo04144                    Pathway                                
Name
Endocytosis - Plasmodium yoelii
Description
Endocytosis is a mechanism for cells to remove ligands, nutrients, and plasma membrane (PM) proteins, and lipids from the cell surface, bringing them into the cell interior. Transmembrane proteins entering through clathrin-dependent endocytosis (CDE) have sequences in their cytoplasmic domains that bind to the APs (adaptor-related protein complexes) and enable their rapid removal from the PM. In addition to APs and clathrin, there are numerous accessory proteins including dynamin. Depending on the various proteins that enter the endosome membrane, these cargoes are sorted to distinct destinations. Some cargoes, such as nutrient receptors, are recycled back to the PM. Ubiquitylated membrane proteins, such as activated growth-factor receptors, are sorted into intraluminal vesicles and eventually end up in the lysosome lumen via multivesicular endosomes (MVEs). There are distinct mechanisms of clathrin-independent endocytosis (CIE) depending upon the cargo and the cell type.
Class
Cellular Processes; Transport and catabolism
Pathway map
pyo04144  Endocytosis
pyo04144

Other DBs
GO: 0006897
Organism
Plasmodium yoelii [GN:pyo]
Gene
PY17X_0204500  phosphatidylinositol-4-phosphate 5-kinase, putative [KO:K00889] [EC:2.7.1.68]
PY17X_1437100  clathrin heavy chain, putative [KO:K04646]
PY17X_0314500  AP-2 complex subunit sigma, putative [KO:K11827]
PY17X_0510300  EF-hand calcium-binding domain-containing protein, putative [KO:K12472]
PY17X_0931300  actin-related protein 2/3 complex subunit 1, putative [KO:K05757]
PY17X_0712100  heat shock protein 70, putative [KO:K03283]
PY17X_1246500  F-actin-capping protein subunit alpha, putative [KO:K10364]
PY17X_1235800  F-actin capping protein subunit beta [KO:K10365]
PY17X_1037900  vacuolar protein sorting-associated protein 29, putative [KO:K18467]
PY17X_1465800  vacuolar protein sorting-associated protein 26, putative [KO:K18466]
PY17X_0939100  vacuolar protein sorting 35 [KO:K18468]
PY17X_0421000  ras-related protein RAB7, putative [KO:K07897]
PY17X_1459300  vacuolar-sorting protein SNF7, putative [KO:K12194]
PY17X_0714800  uncharacterized protein [KO:K12191]
PY17X_1325000  suppressor protein of Bem1/Bed5 double mutants [KO:K12196]
PY17X_0211500  vacuolar protein sorting-associated protein VTA1, putative [KO:K12199]
PY17X_0418000  vacuolar protein sorting-associated protein 46, putative [KO:K12197]
PY17X_1309500  vacuolar protein sorting-associated protein 60, putative [KO:K12198]
PY17X_1309300  acid cluster protein 33 homologue, putative [KO:K19367]
PY17X_0405000  uncharacterized protein [KO:K12483]
PY17X_0313600  uncharacterized protein [KO:K12479]
PY17X_1420600  ras-related protein Rab-11A, putative [KO:K07904]
PY17X_1244200  uncharacterized protein [KO:K12486]
PY17X_1460400  ADP-ribosylation factor GTPase-activating protein, putative [KO:K12492]
PY17X_1228900  uncharacterized protein [KO:K12493]
PY17X_0506200  ADP-ribosylation factor, putative [KO:K07937]
Compound
C00035  GDP
C00044  GTP
C04549  1-Phosphatidyl-1D-myo-inositol 3-phosphate
C04637  1-Phosphatidyl-D-myo-inositol 4,5-bisphosphate
C05981  Phosphatidylinositol-3,4,5-trisphosphate
C11556  1-Phosphatidyl-1D-myo-inositol 3,5-bisphosphate
Reference
  Authors
Acconcia F, Sigismund S, Polo S
  Title
Ubiquitin in trafficking: the network at work.
  Journal
Exp Cell Res 315:1610-8 (2009)
DOI:10.1016/j.yexcr.2008.10.014
Reference
  Authors
Donaldson JG, Porat-Shliom N, Cohen LA
  Title
Clathrin-independent endocytosis: a unique platform for cell signaling and PM remodeling.
  Journal
Cell Signal 21:1-6 (2009)
DOI:10.1016/j.cellsig.2008.06.020
Reference
  Authors
Sorkin A
  Title
Cargo recognition during clathrin-mediated endocytosis: a team effort.
  Journal
Curr Opin Cell Biol 16:392-9 (2004)
DOI:10.1016/j.ceb.2004.06.001
Reference
  Authors
Raiborg C, Stenmark H
  Title
The ESCRT machinery in endosomal sorting of ubiquitylated membrane proteins.
  Journal
Nature 458:445-52 (2009)
DOI:10.1038/nature07961
Reference
  Authors
Scita G, Di Fiore PP
  Title
The endocytic matrix.
  Journal
Nature 463:464-73 (2010)
DOI:10.1038/nature08910
Reference
  Authors
Le Roy C, Wrana JL
  Title
Clathrin- and non-clathrin-mediated endocytic regulation of cell signalling.
  Journal
Nat Rev Mol Cell Biol 6:112-26 (2005)
DOI:10.1038/nrm1571
Reference
  Authors
Jovic M, Sharma M, Rahajeng J, Caplan S
  Title
The early endosome: a busy sorting station for proteins at the crossroads.
  Journal
Histol Histopathol 25:99-112 (2010)
DOI:10.14670/HH-25.99
Reference
  Authors
Pietiainen VM, Marjomaki V, Heino J, Hyypia T
  Title
Viral entry, lipid rafts and caveosomes.
  Journal
Ann Med 37:394-403 (2005)
DOI:10.1080/07853890510011976
Reference
  Authors
Grant BD, Donaldson JG
  Title
Pathways and mechanisms of endocytic recycling.
  Journal
Nat Rev Mol Cell Biol 10:597-608 (2009)
DOI:10.1038/nrm2755
Reference
  Authors
Cullen PJ, Korswagen HC
  Title
Sorting nexins provide diversity for retromer-dependent trafficking events.
  Journal
Nat Cell Biol 14:29-37 (2012)
DOI:10.1038/ncb2374
Related
pathway
pyo04070  Phosphatidylinositol signaling system
pyo04130  SNARE interactions in vesicular transport
KO pathway
ko04144   

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