KEGG   PATHWAY: sjp00970
Entry
sjp00970                    Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Sphingobium indicum UT26S
Class
Genetic Information Processing; Translation
Pathway map
sjp00970  Aminoacyl-tRNA biosynthesis
sjp00970

Organism
Sphingobium indicum UT26S [GN:sjp]
Gene
SJA_C1-t0330  tRNA-Ala [KO:K14218]
SJA_C1-t0340  tRNA-Ala [KO:K14218]
SJA_C1-t0400  tRNA-Ala [KO:K14218]
SJA_C1-t0020  tRNA-Ala [KO:K14218]
SJA_C2-t0040  tRNA-Ala [KO:K14218]
SJA_C2-t0020  tRNA-Ala [KO:K14218]
SJA_C1-t0300  tRNA-Arg [KO:K14219]
SJA_C1-t0240  tRNA-Arg [KO:K14219]
SJA_C1-t0250  tRNA-Arg [KO:K14219]
SJA_C1-t0430  tRNA-Arg [KO:K14219]
SJA_C1-t0410  tRNA-Arg [KO:K14219]
SJA_C1-t0170  tRNA-Asn [KO:K14220]
SJA_C1-t0180  tRNA-Asn [KO:K14220]
SJA_C1-t0150  tRNA-Asp [KO:K14221]
SJA_C1-t0160  tRNA-Asp [KO:K14221]
SJA_C1-t0420  tRNA-Cys [KO:K14222]
SJA_C1-t0440  tRNA-Gln [KO:K14223]
SJA_C1-t0130  tRNA-Gln [KO:K14223]
SJA_C1-t0490  tRNA-Glu [KO:K14224]
SJA_C1-t0320  tRNA-Glu [KO:K14224]
SJA_C1-t0470  tRNA-Gly [KO:K14225]
SJA_C1-t0500  tRNA-Gly [KO:K14225]
SJA_C1-t0380  tRNA-Gly [KO:K14225]
SJA_C1-t0360  tRNA-His [KO:K14226]
SJA_C1-t0010  tRNA-Ile [KO:K14227]
SJA_C2-t0030  tRNA-Ile [KO:K14227]
SJA_C2-t0010  tRNA-Ile [KO:K14227]
SJA_C1-t0310  tRNA-Leu [KO:K14228]
SJA_C1-t0350  tRNA-Leu [KO:K14228]
SJA_C1-t0060  tRNA-Leu [KO:K14228]
SJA_C1-t0080  tRNA-Leu [KO:K14228]
SJA_C1-t0290  tRNA-Leu [KO:K14228]
SJA_C1-t0270  tRNA-Lys [KO:K14229]
SJA_C1-t0370  tRNA-Lys [KO:K14229]
SJA_C1-t0280  tRNA-Lys [KO:K14229]
SJA_C1-t0260  tRNA-Lys [KO:K14229]
SJA_C1-t0390  tRNA-Met [KO:K14230]
SJA_C1-t0030  tRNA-Met [KO:K14230]
SJA_C1-t0200  tRNA-Met [KO:K14230]
SJA_C1-t0070  tRNA-Phe [KO:K14231]
SJA_C1-t0140  tRNA-Pro [KO:K14232]
SJA_C1-t0210  tRNA-Pro [KO:K14232]
SJA_C1-t0090  tRNA-Pro [KO:K14232]
SJA_C1-t0100  tRNA-Ser [KO:K14233]
SJA_C1-t0480  tRNA-Ser [KO:K14233]
SJA_C1-t0220  tRNA-Ser [KO:K14233]
SJA_C1-t0510  tRNA-Ser [KO:K14233]
SJA_C1-t0040  tRNA-Thr [KO:K14234]
SJA_C1-t0120  tRNA-Thr [KO:K14234]
SJA_C1-t0190  tRNA-Thr [KO:K14234]
SJA_C1-t0450  tRNA-Trp [KO:K14235]
SJA_C1-t0110  tRNA-Tyr [KO:K14236]
SJA_C1-t0050  tRNA-Val [KO:K14237]
SJA_C1-t0230  tRNA-Val [KO:K14237]
SJA_C1-t0460  tRNA-Val [KO:K14237]
SJA_C1-03200  gltX; glutamyl-tRNA synthetase [KO:K01885] [EC:6.1.1.17]
SJA_C1-08940  gltX; glutamyl-tRNA synthetase [KO:K01885] [EC:6.1.1.17]
SJA_C1-22090  gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [KO:K02433] [EC:6.3.5.6 6.3.5.7]
SJA_C1-22060  gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B [KO:K02434] [EC:6.3.5.6 6.3.5.7]
SJA_C1-22100  gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C [KO:K02435] [EC:6.3.5.6 6.3.5.7]
SJA_C1-21580  alaS; alanyl-tRNA synthetase [KO:K01872] [EC:6.1.1.7]
SJA_C1-32910  aspS; aspartyl-tRNA synthetase [KO:K01876] [EC:6.1.1.12]
SJA_C1-17790  glyQ; glycyl-tRNA synthetase alpha chain [KO:K01878] [EC:6.1.1.14]
SJA_C1-17780  glyS; glycyl-tRNA synthetase beta chain [KO:K01879] [EC:6.1.1.14]
SJA_C1-07900  thrS; threonyl-tRNA synthetase [KO:K01868] [EC:6.1.1.3]
SJA_C1-12700  serS; seryl-tRNA synthetase [KO:K01875] [EC:6.1.1.11]
SJA_C1-33290  cysS; cysteinyl-tRNA synthetase [KO:K01883] [EC:6.1.1.16]
SJA_C1-16620  metG; methionyl-tRNA synthetase [KO:K01874] [EC:6.1.1.10]
SJA_C1-34820  putative methionyl-tRNA formyltransferase [KO:K00604] [EC:2.1.2.9]
SJA_C1-24550  fmt; methionyl-tRNA formyltransferase [KO:K00604] [EC:2.1.2.9]
SJA_C1-25060  valS; valyl-tRNA synthetase [KO:K01873] [EC:6.1.1.9]
SJA_C1-00420  leuS; leucyl-tRNA synthetase [KO:K01869] [EC:6.1.1.4]
SJA_C1-22910  ileS; isoleucyl-tRNA synthetase [KO:K01870] [EC:6.1.1.5]
SJA_C1-32460  lysS; lysyl-tRNA synthetase [KO:K04566] [EC:6.1.1.6]
SJA_C1-28150  argS; arginyl-tRNA synthetase [KO:K01887] [EC:6.1.1.19]
SJA_C1-16950  proS; prolyl-tRNA synthetase [KO:K01881] [EC:6.1.1.15]
SJA_C1-00620  hisS; histidyl-tRNA synthetase [KO:K01892] [EC:6.1.1.21]
SJA_C1-34560  pheS; phenylalanyl-tRNA synthetase alpha chain [KO:K01889] [EC:6.1.1.20]
SJA_C1-34570  pheT; phenylalanyl-tRNA synthetase beta chain [KO:K01890] [EC:6.1.1.20]
SJA_C1-14250  tyrS; tyrosyl-tRNA synthetase [KO:K01866] [EC:6.1.1.1]
SJA_C1-08270  trpS; tryptophanyl-tRNA synthetase [KO:K01867] [EC:6.1.1.2]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
sjp00250  Alanine, aspartate and glutamate metabolism
sjp00260  Glycine, serine and threonine metabolism
sjp00270  Cysteine and methionine metabolism
sjp00290  Valine, leucine and isoleucine biosynthesis
sjp00300  Lysine biosynthesis
sjp00330  Arginine and proline metabolism
sjp00340  Histidine metabolism
sjp00380  Tryptophan metabolism
sjp00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (81)   
   KEGG GENES (81)   
All databases (82)   

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