KEGG   PATHWAY: tco00030
Entry
tco00030                    Pathway                                
Name
Pentose phosphate pathway - Thermobacillus composti
Description
The pentose phosphate pathway is a process of glucose turnover that produces NADPH as reducing equivalents and pentoses as essential parts of nucleotides. There are two different phases in the pathway. One is irreversible oxidative phase in which glucose-6P is converted to ribulose-5P by oxidative decarboxylation, and NADPH is generated [MD:M00006]. The other is reversible non-oxidative phase in which phosphorylated sugars are interconverted to generate xylulose-5P, ribulose-5P, and ribose-5P [MD:M00007]. Phosphoribosyl pyrophosphate (PRPP) formed from ribose-5P [MD:M00005] is an activated compound used in the biosynthesis of histidine and purine/pyrimidine nucleotides. This pathway map also shows the Entner-Doudoroff pathway where 6-P-gluconate is dehydrated and then cleaved into pyruvate and glyceraldehyde-3P [MD:M00008].
Class
Metabolism; Carbohydrate metabolism
Pathway map
tco00030  Pentose phosphate pathway
tco00030

Module
tco_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:tco00030]
tco_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:tco00030]
tco_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:tco00030]
tco_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:tco00030]
tco_M00631  D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:tco00030]
Other DBs
GO: 0006098
Organism
Thermobacillus composti [GN:tco]
Gene
Theco_0615  glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
Theco_0654  glucose-6-phosphate 1-dehydrogenase [KO:K00036] [EC:1.1.1.49 1.1.1.363]
Theco_0388  glucose-6-phosphate 1-dehydrogenase [KO:K00036] [EC:1.1.1.49 1.1.1.363]
Theco_0665  3-carboxymuconate cyclase [KO:K07404] [EC:3.1.1.31]
Theco_2233  6-phosphogluconate dehydrogenase, decarboxylating [KO:K00033] [EC:1.1.1.44 1.1.1.343]
Theco_2178  ribulose-phosphate 3-epimerase [KO:K01783] [EC:5.1.3.1]
Theco_1278  transketolase, beta subunit [KO:K00615] [EC:2.2.1.1]
Theco_1279  transketolase, alpha subunit [KO:K00615] [EC:2.2.1.1]
Theco_0387  transketolase [KO:K00615] [EC:2.2.1.1]
Theco_0613  transketolase [KO:K00615] [EC:2.2.1.1]
Theco_0386  fructose-6-phosphate aldolase, TalC/MipB family [KO:K00616] [EC:2.2.1.2]
Theco_3882  ribose 5-phosphate isomerase B [KO:K01808] [EC:5.3.1.6]
Theco_2394  deoxyribose-phosphate aldolase [KO:K01619] [EC:4.1.2.4]
Theco_3928  ribokinase [KO:K00852] [EC:2.7.1.15]
Theco_1938  phosphopentomutase [KO:K01839] [EC:5.4.2.7]
Theco_3831  phosphomannomutase [KO:K01835] [EC:5.4.2.2]
Theco_3502  ribose-phosphate pyrophosphokinase [KO:K00948] [EC:2.7.6.1]
Theco_3243  Entner-Doudoroff aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
Theco_0515  Entner-Doudoroff aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
Theco_0508  dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein [KO:K00034] [EC:1.1.1.47]
Theco_2234  pentulose/hexulose kinase [KO:K25031] [EC:2.7.1.12]
Theco_2610  sugar kinase, ribokinase [KO:K00874] [EC:2.7.1.45]
Theco_3540  fructose-1,6-bisphosphate aldolase, class II [KO:K01624] [EC:4.1.2.13]
Theco_1180  ketose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
Theco_1182  ketose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
Theco_0585  fructose-1,6-bisphosphatase, class II [KO:K02446] [EC:3.1.3.11]
Theco_1422  6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
Theco_1176  archaeal ADP-dependent phosphofructokinase/glucokinase [KO:K00918] [EC:2.7.1.146 2.7.1.147]
Compound
C00022  Pyruvate
C00031  D-Glucose
C00085  D-Fructose 6-phosphate
C00117  D-Ribose 5-phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00121  D-Ribose
C00197  3-Phospho-D-glycerate
C00198  D-Glucono-1,5-lactone
C00199  D-Ribulose 5-phosphate
C00204  2-Dehydro-3-deoxy-D-gluconate
C00221  beta-D-Glucose
C00231  D-Xylulose 5-phosphate
C00257  D-Gluconic acid
C00258  D-Glycerate
C00279  D-Erythrose 4-phosphate
C00345  6-Phospho-D-gluconate
C00354  D-Fructose 1,6-bisphosphate
C00577  D-Glyceraldehyde
C00620  alpha-D-Ribose 1-phosphate
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C00672  2-Deoxy-D-ribose 1-phosphate
C00673  2-Deoxy-D-ribose 5-phosphate
C01151  D-Ribose 1,5-bisphosphate
C01172  beta-D-Glucose 6-phosphate
C01182  D-Ribulose 1,5-bisphosphate
C01218  6-Phospho-2-dehydro-D-gluconate
C01236  D-Glucono-1,5-lactone 6-phosphate
C01801  Deoxyribose
C02076  Sedoheptulose
C03752  2-Amino-2-deoxy-D-gluconate
C04442  2-Dehydro-3-deoxy-6-phospho-D-gluconate
C05382  Sedoheptulose 7-phosphate
C06019  D-arabino-Hex-3-ulose 6-phosphate
C06473  2-Keto-D-gluconic acid
C20589  D-Glucosaminate-6-phosphate
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Reference
  Authors
Hove-Jensen B, Rosenkrantz TJ, Haldimann A, Wanner BL.
  Title
Escherichia coli phnN, encoding ribose 1,5-bisphosphokinase activity (phosphoribosyl diphosphate forming): dual role in phosphonate degradation and NAD biosynthesis pathways.
  Journal
J Bacteriol 185:2793-801 (2003)
DOI:10.1128/JB.185.9.2793-2801.2003
Reference
  Authors
Orita I, Sato T, Yurimoto H, Kato N, Atomi H, Imanaka T, Sakai Y
  Title
The ribulose monophosphate pathway substitutes for the missing pentose phosphate pathway in the archaeon Thermococcus kodakaraensis.
  Journal
J Bacteriol 188:4698-704 (2006)
DOI:10.1128/JB.00492-06
Reference
  Authors
Kato N, Yurimoto H, Thauer RK
  Title
The physiological role of the ribulose monophosphate pathway in bacteria and archaea.
  Journal
Biosci Biotechnol Biochem 70:10-21 (2006)
DOI:10.1271/bbb.70.10
Reference
  Authors
Kouril T, Wieloch P, Reimann J, Wagner M, Zaparty M, Albers SV, Schomburg D, Ruoff P, Siebers B
  Title
Unraveling the function of the two Entner-Doudoroff branches in the thermoacidophilic Crenarchaeon Sulfolobus solfataricus P2.
  Journal
FEBS J 280:1126-38 (2013)
DOI:10.1111/febs.12106
Reference
  Authors
Reher M, Schonheit P
  Title
Glyceraldehyde dehydrogenases from the thermoacidophilic euryarchaeota Picrophilus torridus and Thermoplasma acidophilum, key enzymes of the non-phosphorylative Entner-Doudoroff pathway, constitute a novel enzyme family within the aldehyde dehydrogenase superfamily.
  Journal
FEBS Lett 580:1198-204 (2006)
DOI:10.1016/j.febslet.2006.01.029
Reference
  Authors
Reher M, Fuhrer T, Bott M, Schonheit P
  Title
The nonphosphorylative Entner-Doudoroff pathway in the thermoacidophilic euryarchaeon Picrophilus torridus involves a novel 2-keto-3-deoxygluconate- specific aldolase.
  Journal
J Bacteriol 192:964-74 (2010)
DOI:10.1128/JB.01281-09
Related
pathway
tco00010  Glycolysis / Gluconeogenesis
tco00040  Pentose and glucuronate interconversions
tco00052  Galactose metabolism
tco00230  Purine metabolism
tco00240  Pyrimidine metabolism
tco00340  Histidine metabolism
tco00630  Glyoxylate and dicarboxylate metabolism
tco00750  Vitamin B6 metabolism
KO pathway
ko00030   

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