KEGG   PATHWAY: tcr04144
Entry
tcr04144                    Pathway                                
Name
Endocytosis - Trypanosoma cruzi
Description
Endocytosis is a mechanism for cells to remove ligands, nutrients, and plasma membrane (PM) proteins, and lipids from the cell surface, bringing them into the cell interior. Transmembrane proteins entering through clathrin-dependent endocytosis (CDE) have sequences in their cytoplasmic domains that bind to the APs (adaptor-related protein complexes) and enable their rapid removal from the PM. In addition to APs and clathrin, there are numerous accessory proteins including dynamin. Depending on the various proteins that enter the endosome membrane, these cargoes are sorted to distinct destinations. Some cargoes, such as nutrient receptors, are recycled back to the PM. Ubiquitylated membrane proteins, such as activated growth-factor receptors, are sorted into intraluminal vesicles and eventually end up in the lysosome lumen via multivesicular endosomes (MVEs). There are distinct mechanisms of clathrin-independent endocytosis (CIE) depending upon the cargo and the cell type.
Class
Cellular Processes; Transport and catabolism
Pathway map
tcr04144  Endocytosis
tcr04144

Other DBs
GO: 0006897
Organism
Trypanosoma cruzi [GN:tcr]
Gene
504057.104  phosphatidylinositol-4-phosphate 5-kinase alpha [KO:K00889] [EC:2.7.1.68]
509715.120  phosphatidylinositol-4-phosphate 5-Kinase [KO:K00889] [EC:2.7.1.68]
510105.130  phosphatidylinositol-4-phosphate 5-kinase type II beta [KO:K00889] [EC:2.7.1.68]
506167.50  clathrin heavy chain [KO:K04646]
507785.10  clathrin heavy chain [KO:K04646]
481435.9  clathrin heavy chain [KO:K04646]
511391.140  alpha-adaptin-like [KO:K11824]
509715.20  clathrin coat assembly protein [KO:K11826]
510105.30  clathrin coat assembly protein [KO:K11826]
506559.330  clathrin coat assembly protein AP17 [KO:K11827]
506925.70  epsin [KO:K12471]
511361.40  actin-related protein 2 [KO:K17260]
508899.110  actin-related protein 2 [KO:K17260]
508277.260  actin-related protein 3 [KO:K18584]
503913.20  actin-related protein 3 [KO:K18584]
511275.30  ARP2/3 complex subunit [KO:K05757]
504215.40  ARP2/3 complex subunit [KO:K05757]
506865.10  ARP2/3 complex subunit [KO:K05758]
509569.90  ARP2/3 complex subunit [KO:K05758]
508625.30  ARP2/3 complex subunit [KO:K05756]
510963.70  ARP2/3 complex subunit [KO:K05756]
508737.194  ARP2/3 complex subunit [KO:K05755]
509127.104  ARP2/3 complex subunit [KO:K05755]
511635.30  ARP2/3 complex subunit [KO:K05754]
511211.160  heat shock protein 70 (HSP70) [KO:K03283]
511211.170  heat shock protein 70 (HSP70) [KO:K03283]
511211.220  heat shock protein 70 [KO:K03283]
508641.90  hypothetical protein [KO:K18465]
506127.90  hypothetical protein [KO:K18464]
506363.60  F-actin capping protein beta subunit [KO:K10365]
511725.190  vacuolar sorting protein [KO:K18467]
510719.10  vacuolar protein sorting-associated protein-like [KO:K18466]
506337.10  vacuolar protein sorting-associated protein-like [KO:K18466]
511367.170  vacuolar protein sorting-associated protein 35 [KO:K18468]
508461.270  rab7 GTP binding protein [KO:K07897]
506155.50  vacuolar protein sorting-associated protein-like [KO:K12184]
506263.40  hypothetical protein [KO:K12188]
506503.30  hypothetical protein [KO:K12190]
504161.40  hypothetical protein [KO:K12190]
503891.110  hypothetical protein [KO:K12189]
507491.140  hypothetical protein [KO:K12195]
509393.10  hypothetical protein [KO:K12195]
511229.100  hypothetical protein [KO:K12194]
511589.250  hypothetical protein [KO:K12194]
506337.30  SNF7-like protein [KO:K12193]
503675.20  SNF7-like protein [KO:K12193]
508355.170  hypothetical protein [KO:K12191]
506699.40  katanin-like protein [KO:K12196]
510323.4  katanin [KO:K12196]
511003.140  vacuolar transport protein 4A [KO:K12196]
508153.330  katanin-like protein [KO:K12196]
504175.20  hypothetical protein [KO:K12199]
508385.60  hypothetical protein [KO:K12199]
510431.210  vesicular protein trafficking mediator [KO:K12197]
510733.20  hypothetical protein [KO:K12197]
506147.220  hypothetical protein [KO:K12197]
511001.100  SNF-7-like protein [KO:K12198]
506957.110  SNF-7-like protein [KO:K12198]
503593.30  hypothetical protein [KO:K12200]
506127.150  hypothetical protein [KO:K12200]
510187.190  vacuolar protein sorting-associated protein [KO:K12479]
511407.60  small GTP-binding protein Rab11 [KO:K07904]
506151.30  small GTP-binding protein Rab11 [KO:K07904]
511717.100  hypothetical protein [KO:K12486]
507507.20  ADP-ribosylation factor GTPase activating protein 1 [KO:K12492]
506871.30  ADP-ribosylation factor GTPase activating protein 1 [KO:K12492]
510769.140  hypothetical protein [KO:K12493]
510187.448  hypothetical protein [KO:K18442]
508199.10  ADP-ribosylation factor [KO:K07937]
508415.50  ADP-ribosylation factor 1 [KO:K07937]
509297.30  ADP-ribosylation factor [KO:K07937]
508415.40  ADP-ribosylation factor 1 [KO:K07937]
434945.4  ADP-ribosylation factor [KO:K07937]
510755.50  ADP-ribosylation factor 1 [KO:K07937]
510755.60  ADP-ribosylation factor 1 [KO:K07937]
508197.20  ADP-ribosylation factor [KO:K07937]
Compound
C00035  GDP
C00044  GTP
C04549  1-Phosphatidyl-1D-myo-inositol 3-phosphate
C04637  1-Phosphatidyl-D-myo-inositol 4,5-bisphosphate
C05981  Phosphatidylinositol-3,4,5-trisphosphate
C11556  1-Phosphatidyl-1D-myo-inositol 3,5-bisphosphate
Reference
  Authors
Acconcia F, Sigismund S, Polo S
  Title
Ubiquitin in trafficking: the network at work.
  Journal
Exp Cell Res 315:1610-8 (2009)
DOI:10.1016/j.yexcr.2008.10.014
Reference
  Authors
Donaldson JG, Porat-Shliom N, Cohen LA
  Title
Clathrin-independent endocytosis: a unique platform for cell signaling and PM remodeling.
  Journal
Cell Signal 21:1-6 (2009)
DOI:10.1016/j.cellsig.2008.06.020
Reference
  Authors
Sorkin A
  Title
Cargo recognition during clathrin-mediated endocytosis: a team effort.
  Journal
Curr Opin Cell Biol 16:392-9 (2004)
DOI:10.1016/j.ceb.2004.06.001
Reference
  Authors
Raiborg C, Stenmark H
  Title
The ESCRT machinery in endosomal sorting of ubiquitylated membrane proteins.
  Journal
Nature 458:445-52 (2009)
DOI:10.1038/nature07961
Reference
  Authors
Scita G, Di Fiore PP
  Title
The endocytic matrix.
  Journal
Nature 463:464-73 (2010)
DOI:10.1038/nature08910
Reference
  Authors
Le Roy C, Wrana JL
  Title
Clathrin- and non-clathrin-mediated endocytic regulation of cell signalling.
  Journal
Nat Rev Mol Cell Biol 6:112-26 (2005)
DOI:10.1038/nrm1571
Reference
  Authors
Jovic M, Sharma M, Rahajeng J, Caplan S
  Title
The early endosome: a busy sorting station for proteins at the crossroads.
  Journal
Histol Histopathol 25:99-112 (2010)
DOI:10.14670/HH-25.99
Reference
  Authors
Pietiainen VM, Marjomaki V, Heino J, Hyypia T
  Title
Viral entry, lipid rafts and caveosomes.
  Journal
Ann Med 37:394-403 (2005)
DOI:10.1080/07853890510011976
Reference
  Authors
Grant BD, Donaldson JG
  Title
Pathways and mechanisms of endocytic recycling.
  Journal
Nat Rev Mol Cell Biol 10:597-608 (2009)
DOI:10.1038/nrm2755
Reference
  Authors
Cullen PJ, Korswagen HC
  Title
Sorting nexins provide diversity for retromer-dependent trafficking events.
  Journal
Nat Cell Biol 14:29-37 (2012)
DOI:10.1038/ncb2374
Related
pathway
tcr04070  Phosphatidylinositol signaling system
tcr04130  SNARE interactions in vesicular transport
KO pathway
ko04144   

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