KEGG   PATHWAY: tgo03430
Entry
tgo03430                    Pathway                                
Name
Mismatch repair - Toxoplasma gondii
Description
DNA mismatch repair (MMR) is a highly conserved biological pathway that plays a key role in maintaining genomic stability. MMR corrects DNA mismatches generated during DNA replication, thereby preventing mutations from becoming permanent in dividing cells. MMR also suppresses homologous recombination and was recently shown to play a role in DNA damage signaling. Defects in MMR are associated with genome-wide instability, predisposition to certain types of cancer including HNPCC, resistance to certain chemotherapeutic agents, and abnormalities in meiosis and sterility in mammalian systems.
The Escherichia coli MMR pathway has been extensively studied and is well characterized. In E. coli, the mismatch-activated MutS-MutL-ATP complex licenses MutH to incise the nearest unmethylated GATC sequence. UvrD and an exonuclease generate a gap. This gap is filled by pol III and DNA ligase. The GATC sites are then methylated by Dam. Several human MMR proteins have been identified based on their homology to E. coli MMR proteins. These include human homologs of MutS and MutL. Although E. coli MutS and MutL proteins are homodimers, human MutS and MutL homologs are heterodimers. The role of hemimethylated dGATC sites as a signal for strand discrimination is not conserved from E. coli to human. Human MMR is presumed to be nick-directed in vivo, and is thought to discriminate daughter and template strands using a strand-specific nick.
Class
Genetic Information Processing; Replication and repair
Pathway map
tgo03430  Mismatch repair
tgo03430

Other DBs
GO: 0006298
Organism
Toxoplasma gondii [GN:tgo]
Gene
TGME49_236200  DNA mismatch repair protein, C-terminal domain-containing protein [KO:K10858]
TGME49_290640  DNA mismatch repair protein MSH6-1, putative [KO:K08737]
TGME49_261000  MutS domain V domain-containing protein [KO:K08735]
TGME49_235170  ATPase, AAA family protein [KO:K10754]
TGME49_237110  replication factor C subunit 2, putative [KO:K10755]
TGME49_210960  replication factor C subunit 4, putative [KO:K10755]
TGME49_273950  replication factor C subunit 5, putative [KO:K10756]
TGME49_213000  replication factor C, subunit 5, putative [KO:K10756]
TGME49_320110  PCNA2; proliferating cell nuclear antigen PCNA2 [KO:K04802]
TGME49_247460  PCNA1; proliferating cell nuclear antigen PCNA1 [KO:K04802]
TGME49_233090  XPG N-terminal domain-containing protein [KO:K10746] [EC:3.1.-.-]
TGME49_277150  XPG N-terminal domain-containing protein [KO:K10746] [EC:3.1.-.-]
TGME49_236080  replication factor-a protein 1 (rpa1) subfamily protein [KO:K07466]
TGME49_253080  hypothetical protein [KO:K10739]
TGME49_238110  replication factor a protein 3 protein [KO:K10740]
TGME49_258030  DNA polymerase [KO:K02327] [EC:2.7.7.7]
TGME49_233820  DNA polymerase epsilon subunit B protein [KO:K02328]
TGME49_254640  hypothetical protein [KO:K03505]
TGME49_208580  DNA ligase 1, putative [KO:K10747] [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Reference
  Authors
Jiricny J.
  Title
The multifaceted mismatch-repair system.
  Journal
Nat Rev Mol Cell Biol 7:335-46 (2006)
DOI:10.1038/nrm1907
Reference
  Authors
Li GM.
  Title
Mechanisms and functions of DNA mismatch repair.
  Journal
Cell Res 18:85-98 (2008)
DOI:10.1038/cr.2007.115
Reference
  Authors
Marti TM, Kunz C, Fleck O.
  Title
DNA mismatch repair and mutation avoidance pathways.
  Journal
J Cell Physiol 191:28-41 (2002)
DOI:10.1002/jcp.10077
Reference
  Authors
Ikejima M, Shimada T.
  Title
[Molecular mechanism of mismatch repair]
  Journal
Tanpakushitsu Kakusan Koso 46:1124-9 (2001)
KO pathway
ko03430   

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