KEGG   PATHWAY: tpa00970
Entry
tpa00970                    Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Treponema pallidum subsp. pallidum Nichols
Class
Genetic Information Processing; Translation
Pathway map
tpa00970  Aminoacyl-tRNA biosynthesis
tpa00970

Organism
Treponema pallidum subsp. pallidum Nichols [GN:tpa]
Gene
TP_t45  tRNA-Ala [KO:K14218]
TP_t41  tRNA-Ala [KO:K14218]
TP_t15  tRNA-Ala [KO:K14218]
TP_t30  tRNA-Arg [KO:K14219]
TP_t03  tRNA-Arg [KO:K14219]
TP_t31  tRNA-Arg [KO:K14219]
TP_t26  tRNA-Arg [KO:K14219]
TP_t35  tRNA-Arg [KO:K14219]
TP_t24  tRNA-Asn [KO:K14220]
TP_t28  tRNA-Asp [KO:K14221]
TP_t25  tRNA-Cys [KO:K14222]
TP_t06  tRNA-Gln [KO:K14223]
TP_t18  tRNA-Gln [KO:K14223]
TP_t07  tRNA-Glu [KO:K14224]
TP_t08  tRNA-Glu [KO:K14224]
TP_t23  tRNA-Gly [KO:K14225]
TP_t17  tRNA-Gly [KO:K14225]
TP_t32  tRNA-His [KO:K14226]
TP_t12  tRNA-Ile [KO:K14227]
TP_t22  tRNA-Leu [KO:K14228]
TP_t10  tRNA-Leu [KO:K14228]
TP_t44  tRNA-Leu [KO:K14228]
TP_t40  tRNA-Leu [KO:K14228]
TP_t16  tRNA-Leu [KO:K14228]
TP_t39  tRNA-Lys [KO:K14229]
TP_t21  tRNA-Lys [KO:K14229]
TP_t37  tRNA-Met [KO:K14230]
TP_t11  tRNA-Met [KO:K14230]
TP_t29  tRNA-Met [KO:K14230]
TP_t33  tRNA-Phe [KO:K14231]
TP_t34  tRNA-Pro [KO:K14232]
TP_t38  tRNA-Pro [KO:K14232]
TP_t27  tRNA-Pro [KO:K14232]
TP_t04  tRNA-Ser [KO:K14233]
TP_t01  tRNA-Ser [KO:K14233]
TP_t02  tRNA-Ser [KO:K14233]
TP_t05  tRNA-Ser [KO:K14233]
TP_t13  tRNA-Thr [KO:K14234]
TP_t42  tRNA-Thr [KO:K14234]
TP_t19  tRNA-Thr [KO:K14234]
TP_t14  tRNA-Trp [KO:K14235]
TP_t20  tRNA-Tyr [KO:K14236]
TP_t36  tRNA-Val [KO:K14237]
TP_t43  tRNA-Val [KO:K14237]
TP_t09  tRNA-Val [KO:K14237]
TP_0673  glutamyl-tRNA synthetase (gltX) [KO:K01885] [EC:6.1.1.17]
TP_1020  glu-tRNA amidotransferase, subunit A (gatA) [KO:K02433] [EC:6.3.5.6 6.3.5.7]
TP_1021  glu-tRNA amidotransferase, subunit B (gatB) [KO:K02434] [EC:6.3.5.6 6.3.5.7]
TP_1019  glu-tRNA amidotransferase, subunit C (gatC) [KO:K02435] [EC:6.3.5.6 6.3.5.7]
TP_1017  alanyl-tRNA synthetase (alaS) [KO:K01872] [EC:6.1.1.7]
TP_0985  aspartyl-tRNA synthetase (aspS) [KO:K01876] [EC:6.1.1.12]
TP_0609  asparaginyl-tRNA synthetase (asnS) [KO:K01893] [EC:6.1.1.22]
TP_0672  glycyl-tRNA synthetase (glyS) [KO:K01880] [EC:6.1.1.14]
TP_0837  threonyl-tRNA synthetase (thrS) [KO:K01868] [EC:6.1.1.3]
TP_0647  seryl-tRNA synthetase (serS) [KO:K01875] [EC:6.1.1.11]
TP_0091  cysteinyl-tRNA synthetase (cysS) [KO:K01883] [EC:6.1.1.16]
TP_0798  methionyl-tRNA synthetase (metG) [KO:K01874] [EC:6.1.1.10]
TP_0756  methionyl-tRNA formyltransferase (fmt) [KO:K00604] [EC:2.1.2.9]
TP_1035  valyl-tRNA synthetase (valS) [KO:K01873] [EC:6.1.1.9]
TP_0586  leucyl-tRNA synthetase (leuS) [KO:K01869] [EC:6.1.1.4]
TP_0452  isoleucyl-tRNA synthetase (ileS) [KO:K01870] [EC:6.1.1.5]
TP_0644  lysyl-tRNA synthetase (lysS-1) [KO:K04566] [EC:6.1.1.6]
TP_0831  arginyl-tRNA synthetase (argS) [KO:K01887] [EC:6.1.1.19]
TP_0160  prolyl-tRNA synthetase (proS) [KO:K01881] [EC:6.1.1.15]
TP_0641  histidyl-tRNA synthetase (hisS) [KO:K01892] [EC:6.1.1.21]
TP_0973  phenylalanyl-tRNA synthetase alpha subunit (pheS) [KO:K01889] [EC:6.1.1.20]
TP_0015  phenylalanyl-tRNA synthetase beta subunit (pheT) [KO:K01890] [EC:6.1.1.20]
TP_0834  tyrosyl-tRNA synthetase (tyrS) [KO:K01866] [EC:6.1.1.1]
TP_0632  tryptophanyl-tRNA synthetase (trsA) [KO:K01867] [EC:6.1.1.2]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
tpa00250  Alanine, aspartate and glutamate metabolism
tpa00260  Glycine, serine and threonine metabolism
tpa00270  Cysteine and methionine metabolism
tpa00300  Lysine biosynthesis
tpa00330  Arginine and proline metabolism
tpa00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (69)   
   KEGG GENES (69)   
All databases (70)   

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