KEGG   Pectobacterium atrosepticum 21A: GZ59_37950
Entry
GZ59_37950        CDS       T03293                                 
Symbol
hofB
Name
(GenBank) protein transport protein HofB
  KO
K02504  protein transport protein HofB
Organism
pato  Pectobacterium atrosepticum 21A
Brite
KEGG Orthology (KO) [BR:pato00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pato02044]
    GZ59_37950 (hofB)
Secretion system [BR:pato02044]
 Type II secretion system
  Type IVa pilus homolog protein
   GZ59_37950 (hofB)
SSDB
Motif
Pfam: T2SSE AAA_22 MshEN ResIII AAA_19 AAA_16 nSTAND3 AAA_7 AAA_14 AAA_30 AAA_11 DEAD AAA_29 AAA_23 ATPase_2
Other DBs
NCBI-ProteinID: AIK15515
Position
4117820..4119292
AA seq 490 aa
MTDSSFSSEHTLSELQTLCRRYQALLLNLDEQTLSVAVTTSPSAEMIAALRFASNRRIMV
EQWPQARMEQQLNPVNAVAEPAETYHASTDRSSTGQQDQDDASPVAQFIHQTLRLAVQRR
ASDIHFEPLSDSYRVRLRIDGVLQSISAPPPELTNRITARLKIMGKLNIAERRLPQDGQF
SLMLDQQPYSLRIATLPVQQGEKVVLRILQTHQQELALDKLGLTAKALQQVISVLSAAQG
MMLVTGPTGSGKTVTLYSAIRWLNDSSRNICSVEDPVEIPLQGINQTAINPKAELGFGRI
LRALLRQDPDVIMIGEIRDTETAEIAVKAAQTGHLVMSTLHTNSAVETLTRLSHLGIPGY
LLAAALKLIVAQRLVRRLCPHCKTQGEPLLSLPNDVWRGPLHHWQAHGCSHCFSGYYGRV
ALYELLPITPDFQAALAGNASVGELSVLSRNSGFPTLLAAGLELVNDGMTSLAEVYRVVG
DEWSMNQEAQ
NT seq 1473 nt   +upstreamnt  +downstreamnt
atgacggattcttccttctcctccgagcatacgctcagcgagttacaaacactgtgccga
cgttatcaggcattgctgcttaacctcgatgaacaaacgctgtcggtcgccgtcacgacg
tccccttctgcggagatgattgccgcgctgcgtttcgccagcaatcgccgaattatggtg
gaacaatggccacaggccagaatggaacaacagcttaatccggtgaatgccgttgccgag
ccagcagagacttaccatgccagcaccgatcgctccagcactgggcaacaggatcaggat
gacgcctcccccgtcgcgcaatttatccatcaaacgctgcgcctcgccgttcagcgccgc
gcctctgatatccactttgagccgctgtcagacagctatcgtgtgcggctacggattgac
ggtgtgttgcagtcaatatccgcgccccctcccgagctgacaaaccgaattaccgcgcgg
ctgaaaatcatgggcaagttgaatattgccgaaaggcgattaccgcaagacggtcaattc
agcctgatgctggatcaacagccctactcgttacgcatcgctaccctccccgtgcagcaa
ggagaaaaagtcgtactgcgtattttgcagacgcaccagcaagagttggcgctggataag
ctcgggctcaccgcaaaggcattacagcaggttattagcgtgctgagcgccgcacagggg
atgatgctcgtcactggcccaacaggcagtggaaaaacggtgacactttacagtgcgata
cgctggctgaacgatagcagccgcaatatctgtagcgtagaagatccggtcgaaatcccc
ttacagggaatcaaccaaacagccatcaatcctaaagccgagctgggatttggccgaatc
ttacgtgcgctgctgcgacaggatccggacgtcattatgattggtgaaattcgcgatacc
gaaaccgcagaaattgcggtaaaggccgcacaaactggccatctggtcatgtccacgtta
cataccaattctgccgtagaaaccctgactcgcctcagtcatctgggtatccccggctat
ctgttagccgcagcactaaagctcatcgtcgcacagcgtcttgtacgtcgattatgcccg
cactgtaaaacccagggagaaccactactctcactgccaaacgacgtatggcgagggcca
ttacaccattggcaagctcacggctgtagccactgtttctctggctactatggccgtgtc
gcgctctatgaattactgcccatcacgccggattttcaggcagcgttagcgggcaacgcc
agcgtaggggaattatccgttctgtcacgtaactcaggtttcccaacgttgctggctgca
gggctggagctggttaacgacggtatgacctcgcttgctgaagtctatcgagttgttggt
gatgagtggtcgatgaatcaggaggcgcaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (15)   
   Pfam (15)   
All databases (21)   

Download RDF
DBGET integrated database retrieval system