KEGG   Pectobacterium atrosepticum JG10-08: EV46_08345
Entry
EV46_08345        CDS       T03199                                 
Name
(GenBank) choline dehydrogenase
  KO
K00108  choline dehydrogenase [EC:1.1.99.1]
Organism
patr  Pectobacterium atrosepticum JG10-08
Pathway
patr00260  Glycine, serine and threonine metabolism
patr01100  Metabolic pathways
Module
patr_M00555  Betaine biosynthesis, choline => betaine
Brite
KEGG Orthology (KO) [BR:patr00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    EV46_08345
Enzymes [BR:patr01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.99  With unknown physiological acceptors
    1.1.99.1  choline dehydrogenase
     EV46_08345
SSDB
Motif
Pfam: GMC_oxred_N GMC_oxred_C DAO FAD_binding_2 Lycopene_cycl NAD_binding_8 Pyr_redox_2 Thi4 HI0933_like
Other DBs
NCBI-ProteinID: AIA70594
Position
1918226..1919905
AA seq 559 aa
MEYDYIIIGAGSAGNVLAARLTEESDVSVLLLEAGGPDYRLDFRTQMPAALAFPLQGKRY
NWAYETDPEPHMNDRRMECGRGKGLGGSSLINGMCYIRGNAMDFDHWATMSGLEDWSYLD
CLPYFRKAETRDVGANDYHGASGPVSVTTPKMGNNELFHAMVEAGVQAGYPRTDDLNGYQ
QEGFGPMDRTVTPKGRRASTARGYLDQAKSRKNLTIVTHALTDRILFDGKRAVGVAYFKG
ESAQTAKARREVLLCAGAIASPQILQRSGVGPKDLLQRLDISVVHDLPGVGENLQDHLEM
YLQYACKEPVSLYPALQWFNQPKIGAEWLFNGTGIGASNQFEAGGFIRSRDEFTWPNIQY
HFLPVAINYNGSNAVKEHGFQAHVGSMRSLSRGRVQVRSKDAREHPSILFNYMSTEQDWQ
EFRDAIRITREIMAQPALDKYRGREISPGLAVQTDEELDEFIRTHAETAFHPSCSCKMGE
DDMSVVDGQGCVHGMEGLRVVDASIMPQIITGNLNATTIMIAEKIADRIRRRQPLPRSKA
RYYVAGSTPVRKAPLKPAS
NT seq 1680 nt   +upstreamnt  +downstreamnt
atggaatatgattacatcattatcggtgctggctcagcaggcaatgtgctggctgcgcgt
ttaacagaagaaagcgatgtgagcgtgctgctgcttgaggcgggtggccccgactatcgg
ctggattttcgtacacagatgcccgccgcattagccttcccattacaggggaaacgctat
aactgggcctatgaaaccgatcccgagcctcatatgaatgatcgccgaatggaatgcggt
cgaggaaaaggattgggtggttcgtcgctgattaacggaatgtgttacatccgcggcaat
gcgatggattttgatcactgggcgactatgtcgggtctggaagattggagttaccttgac
tgcctgccgtatttccgcaaagcggaaacgcgggatgtgggggcgaatgactaccatggc
gcgtctggccctgtttcggttacaacaccgaagatgggaaacaacgaactgtttcacgcg
atggttgaagctggcgtgcaggcgggctatccgcgtacggacgatctcaacgggtatcag
caggaaggctttgggccgatggacagaaccgtcacgccgaaggggcgtcgcgccagcacc
gcccgtggctatttggatcaggcgaaaagccgtaagaatctgactatcgtgacgcatgcc
ttaaccgacaggattctctttgacggaaaacgtgctgttggcgtggcttactttaaaggc
gaaagtgcccagacggcaaaggcacgccgcgaagtgcttttgtgtgctggtgcaattgcc
tcaccgcaaattctgcaacgttctggtgtggggccgaaagatttgctccagaggctcgat
atttcagtggtgcacgatttgcccggtgtcggcgagaatttgcaggaccatctggaaatg
tatttgcaatatgcctgcaaagaaccggtatcgctctatccggcattgcagtggtttaat
cagccgaaaatcggcgcggaatggttgttcaacggcacaggcattggtgctagcaaccag
ttcgaggcgggcggttttattcgcagtcgggacgaattcacctggccgaatattcaatac
catttcctgcccgtcgcgattaattacaacggcagcaatgcagtgaaagagcacgggttt
caggcgcacgtcggttctatgcgctcactcagtcgggggcgtgttcaggtgcgctccaaa
gatgcccgcgagcaccctagcatcctgttcaactacatgtcaacggaacaagattggcag
gagtttcgtgacgcgatccgcattacgcgtgaaatcatggcgcagccagcgctcgataaa
taccgtgggcgagagatcagtcctggtctggcagttcagacggatgaggaactggatgag
ttcatccgcactcatgctgagacggcattccatccctcttgctcctgcaagatgggagag
gacgacatgtcggttgtcgatgggcaagggtgtgtccacggcatggaaggattgcgtgtt
gtcgatgcttccatcatgccgcagattattactggtaatctgaatgcgacgaccatcatg
atcgcggagaagattgcagaccgaattcgccgtcgtcagcctctgccacgcagcaaggcg
cgctactatgtcgctggaagcacgccagtgagaaaagcgccgttgaaacccgcgtcataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (9)   
   Pfam (9)   
All databases (24)   

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