KEGG T06637: NCTC13651

Propionibacterium australiense: NCTC13651_00460

Entry

NCTC13651_00460   CDS       T06637

Symbol

topA

Name

(GenBank) DNA topoisomerase 1

K03168

DNA topoisomerase I [EC:5.6.2.1]

Organism

paus Propionibacterium australiense

Brite

KEGG Orthology (KO) [BR:paus00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:paus03032]
    NCTC13651_00460 (topA)
   03400 DNA repair and recombination proteins [BR:paus03400]
    NCTC13651_00460 (topA)
Enzymes [BR:paus01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     NCTC13651_00460 (topA)
DNA replication proteins [BR:paus03032]
Prokaryotic type
  DNA Topoisomerases
   NCTC13651_00460 (topA)
DNA repair and recombination proteins [BR:paus03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      NCTC13651_00460 (topA)

SSDB

Motif

Pfam:

Topoisom_bac Toprim_C_rpt Toprim Toprim_4 Toprim_2

Other DBs

NCBI-ProteinID:

VEH89245

Position

1:562857..565643

AA seq 928 aa
MADTPRRLVIVESPTKATKIADYLGTGYVVESSRGHVRDLPTSAAEVPAKYKGQPWARTG
VNVDADFAPIYVVSADKKATIRQLKADLKDSDELYLATDGDREGEAIAWHLLQELKPKVP
VKRMVFNEITKDAIQEAVAHPRELDEDLVQAQETRRILDRLYGYEVSPVLWKKVMPRLSA
GRVQSVATRLIVDRERERMAFRSASYWDLEATLDAGAGADPRQFTARLVGLDGRRIAQGS
SFDALGRAKSGVIVLDEDAAARLTAALEKAPFAVTAVEAKPYTRRPAAPFRTTTLQQEAG
RKLGFTTDRTMRVAQELYEGGWITYMRTDSVTLSDQAVSAARDAVRVLYGPDYLSDKPRV
YASKVKNAQEAHEAIRPAGADFRTPAQSGLEGDKFRLYELVWQRTVASQMADAVGQQVSV
RIEGTCALPVDLGEQAPAVRAAQFTASGRTITFPGFLKAYVESTDDPAEKSARLPELAAD
QPLDPVRVAAEGHTTKPPARFTEPSLVAKLEELDIGRPSTYASIIRTITSRDYVFKKGTA
LVPTWLAFAVTRLLEEHFTALVDYDFTADLEEQLDSIAKGQADRLEVLRDFYFGPRGEQS
QTSGQTVREGLHELTTALGDIDARALSTFHIGDLDSGIDVRVGRYGTYVEDEDSHRANVP
EDMAPDELTVETARELLARTSSGDRELGLDPETHLAIAVRSGRYGPYVTEVLPEDEEPAR
GGKKAKPRTASLFRSMDPATVTLEDALRLLSLPRVIGGEGDDVITAQNGRYGPYLKKGSD
TRSLPSEEAIFTTTLEEANELFAQPKRRGRSSTAPLKELGEDPANGKPIVVKDGRFGPYV
TDGETNATLRRTDSVEAMTLERAAELLAEKRAKGPAPRRRTTRTSSARKTTTKKTGAGKT
TTKKSSGAKPASGARAASKPASAANTTE

NT seq 2787 nt +upstreamnt +downstreamnt
gtggcagacactccgcgccgactcgtcatcgtcgagtcaccaacaaaggcgaccaagatc
gccgattatctcggcaccggctacgtcgtcgagtcgagccggggacacgtgcgcgacctg
ccgaccagcgctgccgaggtgcccgccaagtacaagggccagccctgggcgcgcacggga
gtcaacgtcgacgccgacttcgcgccgatctacgtggtgagcgccgacaagaaggccacc
atccgccagctcaaggccgatctcaaggactccgacgagctctacctggccaccgacggt
gaccgcgagggtgaggccatcgcctggcacctgctgcaggaactcaaaccgaaggttccg
gtcaagcgcatggtcttcaacgagatcaccaaggacgccatccaggaggccgtcgcccac
ccgcgcgaactcgacgaggacctcgtccaggcccaggagacccgccggatcctcgaccgg
ctctacggctacgaggtcagccccgtgctgtggaagaaggtcatgccgcggctgtcggcc
ggccgggtgcagtccgtcgccacccggctgatcgtcgaccgcgagcgcgaacgcatggcg
ttccggtccgcctcctactgggacctggaggccaccctcgatgcgggggccggcgccgac
ccgcgccagttcaccgcccgcctggtcggactcgacggccgccggatcgcccagggcagc
agcttcgacgccctcggcagggccaagagcggggtcatcgtcctcgacgaggacgcggcc
gcccgcctcaccgcggccctcgagaaggccccgttcgccgtcaccgccgtcgaggccaag
ccctacacccgccgcccggccgcccccttccgcaccacgacactgcagcaggaggccggc
cgcaagctcggcttcaccaccgaccgcacgatgcgcgtcgcccaggagctgtacgagggc
ggctggatcacttacatgcgtaccgactcggtcacgctctcggaccaggccgtcagcgcc
gcacgcgacgcagtaagggtcctctacggccccgactacctgtccgacaagccacgcgtc
tacgccagcaaggtcaagaacgcccaggaggcccacgaggccatccgcccggccggcgcc
gacttccgcaccccggcccagtccggcctcgaaggcgacaagttccgcctgtacgagctc
gtctggcagcgcaccgtcgcctcgcagatggccgacgcggtcggccagcaggtgagcgtg
cgcatcgagggcacctgcgccctgccggtcgatctcggcgagcaggccccggcggtgcgg
gccgcccagttcaccgcctcgggccgcaccatcaccttccccggcttcctcaaggcctac
gtcgagtccaccgacgaccccgccgagaagtcggcgcgcctgcccgagctcgcggccgac
cagccactcgacccggtcagggtcgccgccgaggggcacaccacgaaacccccggcgcgt
ttcaccgagccgagcctggtcgccaagctcgaggaactcgacatcggccgcccctcgacc
tatgcgtcgatcatccgcaccatcacgagccgcgactacgtcttcaagaagggcaccgcg
ctcgtgccgacctggctggcgttcgccgtgacccgcctgctcgaggagcacttcaccgcg
ctcgtcgactacgacttcaccgccgacctggaggagcagctcgactcgatcgcaaagggc
caggcagaccgactcgaggtcctgcgcgacttctacttcgggccgcggggcgagcagtcc
cagacctcggggcagacggtccgggagggcctgcacgagctgaccaccgcgctgggcgac
atcgacgcgcgggccctgtcgaccttccacatcggtgacctcgactccggcatcgacgtc
cgtgtcggacgctacggcacctacgtcgaggacgaggactcgcaccgggccaacgtgccc
gaggacatggcccccgacgaactgaccgtcgagaccgcccgcgagctgctggccaggacc
agcagcggtgaccgggaactgggtctcgaccccgagacccacctggcgatcgcggtgcgg
agcgggcgctacgggccgtacgtcacggaggtcctgccggaggacgaggaaccggccagg
ggcggcaagaaggccaagccccgcacggccagcctcttccgctcgatggatccggccacc
gtcaccctggaggacgccctccggctgctcagcctgccgcgcgtcatcggtggcgagggc
gacgacgtcatcaccgcccagaacggccgctacggcccgtatctcaagaagggcagcgac
acacgctcgctgcccagtgaggaggccatcttcaccacgaccctggaggaggccaacgag
ctcttcgcccagcccaagcgccggggccgttcctccacggcaccgctgaaggagctcggc
gaggacccggccaacggcaagccgatcgtcgtcaaggacggcaggttcggcccctacgtc
accgacggcgagaccaacgcgaccctgcgcaggacggactccgtcgaggccatgaccctg
gagcgcgcggctgagctgctcgccgagaaacgagccaagggcccggcccccagacgccgc
accacgcgcacgtcgtcggcgaggaagaccacgacgaagaagaccggtgcggggaagacc
accaccaagaagtcgtcgggcgcgaaaccggcctcgggggcgagggccgcctcgaagccg
gcttctgccgcgaacaccaccgaatga

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (5)   
   Pfam (5)   
All databases (13)   

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