KEGG   Pseudonocardia autotrophica: Pdca_17280
Entry
Pdca_17280        CDS       T06156                                 
Name
(GenBank) oligoribonuclease
  KO
K13288  oligoribonuclease [EC:3.1.-.-]
Organism
paut  Pseudonocardia autotrophica
Brite
KEGG Orthology (KO) [BR:paut00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:paut03019]
    Pdca_17280
   03009 Ribosome biogenesis [BR:paut03009]
    Pdca_17280
Messenger RNA biogenesis [BR:paut03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     Pdca_17280
Ribosome biogenesis [BR:paut03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    Pdca_17280
SSDB
Motif
Pfam: RNase_T Rv2179c-like
Other DBs
NCBI-ProteinID: BBG00519
Position
complement(1770041..1770682)
AA seq 213 aa
MTDRLVWIDCEMTGLDLGKDALIEIAALVTDGDLNVLGDGVDVVISCDEEKLAGMPDVVR
DMHARSGLTEEVRRATVTLEEAEQRVLDYVRAHVPDARSAPLAGNSIATDRGFLTRDMPE
LDGYLHYRMIDVSSVKELARRWFPRVFYAKPEKGLAHRALADIQESIRELAYYRKALFVA
PPGPTTQQAQAAAAAVADVAAGVDPQAGDGPRA
NT seq 642 nt   +upstreamnt  +downstreamnt
atgacggaccggctggtgtggatcgactgcgagatgaccgggctcgacctcggcaaggac
gcgctcatcgagatcgcggcgctggtcaccgacggcgatctgaacgtcctgggcgatggt
gtcgacgtcgtgatcagctgcgacgaggagaagctcgccgggatgccggacgtcgtgcgg
gacatgcacgcccggtccgggctgaccgaggaggtccgccgggcgacggtgaccctggag
gaggccgagcagcgggtgctcgactacgtccgggcgcacgtcccggacgcccgcagcgcg
ccgctggccggcaactcgatcgcgaccgaccgtggattcctgacccgcgacatgcccgag
ctcgacggctacctgcactaccggatgatcgacgtcagctcggtcaaggagctcgcccgc
cgctggttcccgcgggtgttctacgcgaagccggagaagggcctggcgcaccgcgccctc
gccgacatccaggagtcgatccgggaactggcgtactaccgcaaggcgctgttcgtcgcc
ccgcccggaccgaccacgcagcaggcccaggcggcggccgccgccgtcgcggacgtcgcc
gcgggagtggatccgcaggccggagacggtccgcgggcctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (2)   
   Pfam (2)   
All databases (8)   

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