KEGG   Pseudonocardia autotrophica: Pdca_26580
Entry
Pdca_26580        CDS       T06156                                 
Symbol
recB
Name
(GenBank) RecBCD enzyme subunit RecB
  KO
K03582  exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
Organism
paut  Pseudonocardia autotrophica
Pathway
paut03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:paut00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Pdca_26580 (recB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:paut03400]
    Pdca_26580 (recB)
Enzymes [BR:paut01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     Pdca_26580 (recB)
DNA repair and recombination proteins [BR:paut03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     Pdca_26580 (recB)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_30 PDDEXK_1 AAA_22 ResIII
Other DBs
NCBI-ProteinID: BBG01449
Position
complement(2791284..2794799)
AA seq 1171 aa
MTAVLSAPTFSVDGPLPEGTVVLEASAGTGKTYTIAALATRYVAEGIAGLDRLMLVTFGR
DATQELRERVRERLVGTERALAAVLAGAAVPDTDPVVALLAAGDPADVERRRARLAEASA
SFDAATIATTHQFCMQMLAGLGVAGDNDPEAEFVEHVDDVVTEVVDDFYVRKYANPDAGR
PAFTRAEALALARRAVADPQAELEPRDADPRSVAAVRHGFATAVRREVDARKRRLRIYSY
DDMLTRLAQALRDPLRGPAARERLRSRFSVVLVDEFQDTDPLQWEILSLAFHSAPGTTLV
LIGDPKQAIYAFRGADVHSYLQARAAATERRTLSTNRRSDRALLGALERVFGEATLGDPE
IVVHPVDAHHTTSRLTAPRDAPLRLRLVDRDRLDLTGRQLGRAPGARRVVARDVAADLSE
LLAGSATYDGEPLRPGQVAVLVRTNAQGVLVRDACAQAGVPAVLTGSTSVFTTPAALDWL
TLLEAVEQPQRTLRLRAAALTRFVGHTVADLCGPDADRLVDALGADLRGWHTVLAERGVA
ALAEAVFARYAPARRLLSRPDGERDLTDLRHVGQVVHSAALERHLGPTALTEWLRHRIGE
AARDTSAERSRRLESDADAVQIVTVHRSKGLEFPVVYLPFAWDRWVNDTPDPLLYHDTAP
GGGPRRLLDVGGSTGPDRPGRTALHQAEEAGEDLRLLYVALTRACSQVVAWWVPATTTAA
SSLHRVLLGHGGPGAEPATTAKVPGDAVALQYLRERLDGSGAIVETLHDREPVRRPADPD
DDQPAVAEFRRSLDTAWRRTSYTALTAAAHAAHRIPLGDEPDEAPAGTPGVLTEPEVEGI
RDEPEAAGGPAGPVTTGPRSGAAEPQPGAAGARSAATGPQPGPDPAAVPSPMADLPMGAG
FGTLVHAVLEHLDTTVAARGDDALRTELVAHVTAELTRQPADVDPEALADALVPVLRTPL
GPLASGRSLADFAPADRLSELDFELPLRGGDTPTGLLTLAGLATAVRNRIGPGDPLHGYA
DRLDGPDLAGQPLRGYLTGSIDSVLRVDGRYLVVDYKTNWLGPAGPSGREPLTAAHYTAD
RMAEAMSDAHYPLQALLYAVALHRFLRWRLPDYDPESHLGGVGYLFLRGMCGPATPVTGV
PPLAAPCGVFAWRPPAALVEDLSELLDGART
NT seq 3516 nt   +upstreamnt  +downstreamnt
gtgaccgccgttctctccgccccgaccttctccgtcgacgggccgctgcccgagggcacc
gtcgtgctggaggccagcgccgggaccgggaagacctacacgatcgccgcgctggccacc
cgctacgtggccgaggggatcgccgggctggaccggctgatgctggtcaccttcggccgc
gacgccacccaggagctgcgggaacgggtccgggagcggctggtcggcaccgagcgggcg
ctcgccgcggtgctcgccggtgcggccgtgccggacaccgatccggtagtcgcgctgctc
gccgcgggcgacccggccgacgtcgagcggcggcgggcccggctggcggaggcgtcggcg
tcgttcgacgcggccacgatcgccaccacccaccagttctgcatgcagatgctggccggg
ctcggggtggccggcgacaacgatccggaggccgagttcgtcgagcacgtcgacgacgtc
gtcaccgaggtcgtcgacgacttctacgtccgcaagtacgcaaacccggatgccgggcgg
cccgccttcacccgcgccgaggcactcgcgctggcccgccgcgcggtcgccgacccgcag
gccgagctggagccccgcgacgccgatccacgctccgtcgcggcggtgcggcacggcttc
gccaccgccgtgcggcgcgaggtcgacgcccgcaagcggcggctgcggatctacagctac
gacgacatgctgacccggctggcccaggcgctgcgcgacccgctgcgcggtccggcggcc
cgggagcggctgcggtcgcgcttctcggtggtcctggtggacgagttccaggacaccgat
ccgctgcagtgggagatcctgtcgctggccttccactcggcgcccggcacgacgctggta
ctgatcggcgatcccaagcaggcgatctacgcgttccgcggggccgacgtgcacagctac
ctgcaggccagggctgccgcgaccgagcggcgcacgctgtccaccaaccggcgcagcgac
cgggcgttgctcggcgccctggagcgggtgttcggcgaggccacgctgggcgacccggag
atcgtcgtgcacccggtcgacgcgcaccacacgacgagcaggctcaccgccccgcgggac
gcgccgctgcggctgcgcctggtcgaccgggaccggctcgatctcaccggccggcagctg
ggccgggcccccggcgcacggagggtcgtggcccgcgacgtcgccgccgacctgtcggag
ctgctcgccggctcggcgacctacgacggcgagccgctgcgccccggtcaggtcgccgtc
ctggtccggacgaacgcgcagggtgtcctggtccgcgacgcctgcgcgcaggccggtgtc
cccgcggtgctgaccggcagcaccagcgtgttcaccaccccggccgcgctggactggctc
accctgctggaggccgtcgagcagccgcagcggacattgcggctgcgggcggcggcgctg
acccggttcgtcgggcacaccgtcgccgatctctgcgggcccgacgccgaccggctggtc
gacgcgctcggtgccgacctgcgcggctggcacacggtgctcgccgagcgcggggtcgcc
gcgctggccgaggcggttttcgcccggtacgccccggcccggcggctgctgtcccggccg
gacggcgagcgcgacctcaccgacctgcggcacgtcgggcaggtcgtgcactcggccgcg
ctggagcgccatctcggcccgaccgccctcaccgagtggctgcggcaccggatcggcgag
gccgcccgggacacctccgccgagcgcagcaggcgcctcgagtccgacgccgacgccgtc
cagatcgtcaccgtgcaccggtcgaagggcctcgagttcccggtcgtctacctgccgttc
gcctgggaccgctgggtcaacgacacccccgacccgctcctgtaccacgacaccgccccc
ggtggcgggccgcggcggttgctcgacgtcggcggatcgaccggcccggaccggccgggt
cgcaccgcgctgcaccaggccgaggaggccggcgaggacctgcggctgctctacgtcgcc
ctgacccgcgcgtgcagccaggtcgtcgcctggtgggtgcccgcgacgaccaccgcggcg
tcgtcgctgcaccgggtcctgctcgggcacggcgggcccggtgccgagccggccaccacc
gcgaaggtccccggcgacgcggtagctctgcagtacctgcgggagcggctcgacggcagc
ggcgcgatcgtggagaccctgcacgatcgcgagccggtgcgccgccccgccgatccggac
gacgaccagcccgcggtcgcggagttccgccgcagcctggacacggcatggcggcgcacg
tcctacaccgcgctcaccgcggccgcgcacgccgcgcaccggattccgctcggcgacgaa
ccggacgaggcaccggcgggcacgccgggggtgctcaccgaacccgaggtcgagggcatc
cgcgacgagccggaggccgccggtgggcccgcggggccggtcaccaccgggccgcgatcg
ggcgctgccgagccgcagccgggggccgccggagcgcgatcagcggccaccgggccgcag
ccggggcccgatccggccgccgtgccgtcgccgatggcggacctgccgatgggcgccggc
ttcggcaccctggtgcacgccgtcctggaacacctcgacacgaccgtcgccgcgcgaggc
gacgacgcgctgcgcaccgagctggtcgcccacgtcaccgcggagctgacccgccagccc
gccgacgtcgatcccgaggcactggccgacgcgctggtgccggtgctgcgcaccccgctc
ggcccgctcgcgtccggccggtcactcgccgacttcgcccccgccgaccggctctccgag
ctcgacttcgagctgccgctgcgcggcggcgacaccccgaccggcctgctcaccctcgcc
gggctcgccacggccgtccgcaaccggatcgggcccggtgacccgctgcacggttacgcc
gaccggctcgacggtcccgacctggccgggcagccgctgcgcggttacctgaccggcagc
atcgactcggtgctgcgggtcgacgggcgctacctggtcgtcgactacaagacgaactgg
ctcggcccggcggggccgagcgggcgggagccgctcaccgcggcgcactacaccgcggac
cggatggccgaggccatgagcgacgctcactacccgctgcaggccctgctctacgcggtc
gcgctgcaccgtttcctgcgctggcggttgccggactacgacccggagagccatctgggc
ggtgtcggctatctgttcctgcgcggcatgtgcgggccggcgaccccggtgaccggtgtt
cccccgctggccgcgccgtgcggggtgttcgcctggcggccaccggccgcgctggtcgag
gacctgtcggagctgctggacggagcccgcacatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (8)   
   Pfam (8)   
All databases (16)   

Download RDF
DBGET integrated database retrieval system